RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 SMUG1Q53HV7 270 aa13.95□□□□□ -0.18
SYNGAP1-202ENST00000418600 TMEM252Q8N6L7 170 aa13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 A0A1B0GTI1 187 aa13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 FABP2P12104 132 aa13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 C5orf64Q2M2E5 130 aa13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 A0A087X0M5 115 aa13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 A0A1B0GX30 115 aa13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 SMIM6P0DI80 62 aa13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 ST6GAL2Q96JF0 529 aa13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 HSPB1P04792 205 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 CCL1P22362 96 aa13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 SUMO2P61956 95 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 SPSB3Q6PJ21 355 aa13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 SLC25A48Q6ZT89 311 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-202ENST00000418600 LMO1P25800 156 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 KIR3DL3Q8N743 410 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 SLC50A1Q9BRV3 221 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 MAP1BP46821 2468 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 NDUFB4O95168 129 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 TAF15Q92804 592 aaKnown RBP eCLIP13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 APC2O95996 2303 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 VN1R17PQ8TDU5 208 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 NABP2Q9BQ15 211 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 SHISA9B4DS77 424 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 H7C2G1 150 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 LYPD3O95274 346 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 ICAM4Q14773 271 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 DNLZQ5SXM8 178 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 GOLT1AQ6ZVE7 132 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 Q8TCH9 128 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 SPSB4Q96A44 273 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 HIST1H4GQ99525 98 aa13.93□□□□□ -0.18
SYNGAP1-202ENST00000418600 LOC107984156A0A0G2JMH3 177 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 PKIAP61925 76 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 MEF2BQ02080 365 aaPredicted RBP13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 ARL17AQ8IVW1 177 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 C2orf88Q9BSF0 95 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 SYNJ2BPP57105 145 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 SMIM8Q96KF7 97 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 PROK2Q9HC23 129 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 LTBP2Q14767 1821 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 TRGV11A0A075B6L2 103 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 OR10AG1Q8NH19 301 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 HS3ST6Q96QI5 342 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 GPR132Q9UNW8 380 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 CACNA1EQ15878 2313 aa13.92□□□□□ -0.18
SYNGAP1-202ENST00000418600 H3BRM9 83 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 PIN1P1O15428 100 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 LEPROTL1O95214 131 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 MIXL1Q9H2W2 232 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 TRBV9A0A0B4J1U6 114 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 C11orf91Q3C1V1 193 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 ACTL10Q5JWF8 245 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 ISOC2Q96AB3 205 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 PGLYRP4Q96LB8 373 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 PMCHL2Q9BQD1 86 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 VPREB3Q9UKI3 123 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 DEFB112Q30KQ8 113 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 OR13C6PQ8NH95 151 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 MBNL3Q9NUK0 354 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 K7ERU9 68 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 MALP21145 153 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 PRADC1Q9BSG0 188 aa13.91□□□□□ -0.18
SYNGAP1-202ENST00000418600 IGHV2-5P01817 119 aa13.9□□□□□ -0.18
SYNGAP1-202ENST00000418600 LRRC75A-AS1Q8N1F1 130 aa13.9□□□□□ -0.18
SYNGAP1-202ENST00000418600 GATAD1Q8WUU5 269 aa13.9□□□□□ -0.18
SYNGAP1-202ENST00000418600 KCNS1Q96KK3 526 aa13.9□□□□□ -0.18
SYNGAP1-202ENST00000418600 EP300Q09472 2414 aaPredicted RBP13.9□□□□□ -0.18
SYNGAP1-202ENST00000418600 IGHV4-39P01824 125 aa13.9□□□□□ -0.18
SYNGAP1-202ENST00000418600 TDGF1P3P51864 188 aa13.9□□□□□ -0.18
SYNGAP1-202ENST00000418600 ELF5Q9UKW6 265 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 TRBV6-7A0A0A0MS04 114 aa13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 C15orf61A6NNL5 157 aa13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 CD7P09564 240 aa13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 ZNF25P17030 456 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 C9orf62Q8N4C0 152 aa13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 NUDT10Q8NFP7 164 aa13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 RNF125Q96EQ8 232 aa13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 WFDC12Q8WWY7 111 aa13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 IGKV1D-17A0A075B6S4 117 aa13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 GPX4P36969 197 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 TMEM187Q14656 261 aa13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 AURKAIP1Q9NWT8 199 aaPredicted RBP13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 CFAP161Q6P656 301 aa13.89□□□□□ -0.19
SYNGAP1-202ENST00000418600 C7orf66A4D0T2 115 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 FBLL1A6NHQ2 334 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 TMEM250H0YL14 139 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 CACNG7P62955 275 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 COL5A1-AS1Q5SY13 56 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 CACNG8Q8WXS5 425 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 HIST1H2BAQ96A08 127 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 PAM16Q9Y3D7 125 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 RPS11P62280 158 aaKnown RBP eCLIP13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 C9orf66Q5T8R8 295 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 OR11H1Q8NG94 326 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 OR11H4Q8NGC9 324 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 NDUFS7O75251 213 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 IGHV4-61A0A0C4DH41 118 aa13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 A0A1W2PNU3 283 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-202ENST00000418600 CYB561D1Q8N8Q1 229 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms