RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GDF5OSQ5U4N7 250 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 GSG1LQ6UXU4 331 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 SPATA12Q7Z6I5 190 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 ZNRF2Q8NHG8 242 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 MOB3AQ96BX8 217 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 SEC22AQ96IW7 307 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 FAM210BQ96KR6 192 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 NEU1Q99519 415 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 YTHDF1Q9BYJ9 559 aaKnown RBP8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 CCDC90BQ9GZT6 254 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 FXYD6Q9H0Q3 95 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 NDUFB11Q9NX14 153 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 RHBDL2Q9NX52 303 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 DAPK2Q9UIK4 370 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 NBDYA0A0U1RRE5 68 aa8.37□□□□□ -1.07
SPTLC1P3-201ENST00000403408 IGKV1-17P01599 117 aa8.37□□□□□ -1.07
SPTLC1P3-201ENST00000403408 HTN3P15516 51 aa8.37□□□□□ -1.07
SPTLC1P3-201ENST00000403408 NPPCP23582 126 aa8.37□□□□□ -1.07
SPTLC1P3-201ENST00000403408 RFX2P48378 723 aa8.37□□□□□ -1.07
SPTLC1P3-201ENST00000403408 PRSS48Q7RTY5 328 aa8.37□□□□□ -1.07
SPTLC1P3-201ENST00000403408 C6orf223Q8N319 242 aa8.37□□□□□ -1.07
SPTLC1P3-201ENST00000403408 OR5AP2Q8NGF4 316 aa8.37□□□□□ -1.07
SPTLC1P3-201ENST00000403408 GLMPQ8WWB7 406 aa8.37□□□□□ -1.07
SPTLC1P3-201ENST00000403408 AUNIPQ9H7T9 357 aa8.37□□□□□ -1.07
SPTLC1P3-201ENST00000403408 FAM90A26D6RGX4 464 aa8.36□□□□□ -1.07
SPTLC1P3-201ENST00000403408 CLEC2LP0C7M8 214 aa8.36□□□□□ -1.07
SPTLC1P3-201ENST00000403408 DHRS2Q13268 280 aa8.36□□□□□ -1.07
SPTLC1P3-201ENST00000403408 C16orf54Q6UWD8 224 aa8.36□□□□□ -1.07
SPTLC1P3-201ENST00000403408 DHRS11Q6UWP2 260 aa8.36□□□□□ -1.07
SPTLC1P3-201ENST00000403408 NIPSNAP3BQ9BS92 247 aa8.36□□□□□ -1.07
SPTLC1P3-201ENST00000403408 KRTAP1-5Q9BYS1 174 aa8.36□□□□□ -1.07
SPTLC1P3-201ENST00000403408 TPRKBQ9Y3C4 175 aa8.36□□□□□ -1.07
SPTLC1P3-201ENST00000403408 HELTA6NFD8 242 aa8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 ERICH4A6NGS2 130 aa8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 RNASE2P10153 161 aaKnown RBP8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 NPBWR1P48145 328 aa8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 HSPE1P61604 102 aaKnown RBP8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 TBCEQ15813 527 aaPredicted RBP8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 TIGITQ495A1 244 aa8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 SFXN4Q6P4A7 337 aa8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 TPRA1Q86W33 373 aa8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 ZNF709Q8N972 641 aa8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 ZNF2Q9BSG1 426 aaPredicted RBP8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 TXNL4BQ9NX01 149 aaKnown RBP8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 FKBP11Q9NYL4 201 aa8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 ANAPC10Q9UM13 185 aa8.35□□□□□ -1.07
SPTLC1P3-201ENST00000403408 IGHV3OR16-12A0A075B7B8 117 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 A0A1W2PS18 150 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 CLN5O75503 358 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 IGKV3-20P01619 116 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 PMP2P02689 132 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 PRM2P04554 102 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 HLA-DRB4P13762 266 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 FGF9P31371 208 aaPredicted RBP8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 AQP4P55087 323 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 HERV-K104P61576 105 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 PHLDA2Q53GA4 152 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 C1orf158Q8N1D5 194 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 NRG4Q8WWG1 115 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 MRGPRFQ96AM1 343 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 METTL26Q96S19 204 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 TMEM231Q9H6L2 316 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 RNF167Q9H6Y7 350 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 EHFQ9NZC4 300 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 RRP15Q9Y3B9 282 aaKnown RBP8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 HLA-DRB4X5D2U9 266 aa8.34□□□□□ -1.07
SPTLC1P3-201ENST00000403408 LRP1Q07954 4544 aaKnown RBP8.33□□□□□ -1.08
SPTLC1P3-201ENST00000403408 A0A0B4J293 547 aa8.33□□□□□ -1.08
SPTLC1P3-201ENST00000403408 SCGNO76038 276 aa8.33□□□□□ -1.08
SPTLC1P3-201ENST00000403408 P0C879 139 aa8.33□□□□□ -1.08
SPTLC1P3-201ENST00000403408 OXA1LQ15070 435 aa8.33□□□□□ -1.08
SPTLC1P3-201ENST00000403408 TSC22D3Q99576 134 aa8.33□□□□□ -1.08
SPTLC1P3-201ENST00000403408 C1QTNF4Q9BXJ3 329 aa8.33□□□□□ -1.08
SPTLC1P3-201ENST00000403408 RFNGQ9Y644 331 aa8.33□□□□□ -1.08
SPTLC1P3-201ENST00000403408 TMEM189A5PLL7 270 aa8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 SMIM9A6NGZ8 99 aa8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 GPR31O00270 319 aa8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 IGKV1-5P01602 117 aa8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 INAFM2P0DMQ5 153 aa8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 FUSP35637 526 aaKnown RBP eCLIP8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 ERHP84090 104 aaKnown RBP8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 USF2Q15853 346 aaPredicted RBP8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 OR4X1Q8NH49 305 aa8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 OR4A16Q8NH70 328 aa8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 SLC35B3Q9H1N7 401 aa8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 LINC00588Q9Y4M8 146 aa8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 YTHDF2Q9Y5A9 579 aaKnown RBP8.32□□□□□ -1.08
SPTLC1P3-201ENST00000403408 EPM2AB3EWF7 344 aa8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 INS-IGF2F8WCM5 200 aa8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 NXPH3O95157 252 aa8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 SDC2P34741 201 aa8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 XGP55808 180 aa8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 FAM3BP58499 235 aaPredicted RBP8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 H2BFWTQ7Z2G1 175 aa8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 TBC1D26Q86UD7 250 aa8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 LYSMD2Q8IV50 215 aa8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 TSPAN14Q8NG11 270 aa8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 TMEM230Q96A57 120 aa8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 WDR12Q9GZL7 423 aaKnown RBP8.31□□□□□ -1.08
SPTLC1P3-201ENST00000403408 LOC102723971A0A1B0GUV8 181 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms