RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 OR9G9P0C7N8 305 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 CRYGSP22914 178 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 KIAA2026Q5HYC2 2103 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 TTC32Q5I0X7 151 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 TEX29Q8N6K0 151 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 NEU4Q8WWR8 484 aaPredicted RBP12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 NUDT11Q96G61 164 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 LYNX1G3V0Z9 82 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 LYNX1P0DP58 116 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 Q6AWC8 147 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 FAM71F2Q6NXP2 309 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 NEUROG1Q92886 237 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 TMEM262E9PQX1 116 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 DNAL4O96015 105 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 RTN4RL2Q86UN3 420 aa12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 ZNF418Q8TF45 676 aaPredicted RBP12.66□□□□□ -0.38
UBXN2B-201ENST00000399598 CDKN1AP38936 164 aa12.65□□□□□ -0.38
UBXN2B-201ENST00000399598 WDR83OSQ9Y284 106 aa12.65□□□□□ -0.38
UBXN2B-201ENST00000399598 H7C1H1 209 aa12.65□□□□□ -0.38
UBXN2B-201ENST00000399598 NBR2O15453 112 aa12.65□□□□□ -0.38
UBXN2B-201ENST00000399598 APOMO95445 188 aa12.65□□□□□ -0.38
UBXN2B-201ENST00000399598 EFNB3Q15768 340 aa12.65□□□□□ -0.38
UBXN2B-201ENST00000399598 COPS9Q8WXC6 57 aa12.65□□□□□ -0.38
UBXN2B-201ENST00000399598 SUPT4H1P63272 117 aaKnown RBP12.65□□□□□ -0.38
UBXN2B-201ENST00000399598 C7orf69Q9H7B7 122 aa12.65□□□□□ -0.38
UBXN2B-201ENST00000399598 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.65□□□□□ -0.384e-11■■■■■ 32.7
UBXN2B-201ENST00000399598 A0A1B0GWB2 263 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 ITLN2Q8WWU7 325 aaPredicted RBP12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 EPDR1Q9UM22 224 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 USF3Q68DE3 2245 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 PLAURQ03405 335 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 LHFPL1Q86WI0 220 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 C1QL4Q86Z23 238 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 TMEM133Q9H2Q1 129 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 OTORQ9NRC9 128 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 CHD5Q8TDI0 1954 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 PRB4P10163 310 aaPredicted RBP12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 NIT1Q86X76 327 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 RNF125Q96EQ8 232 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 LAMTOR2Q9Y2Q5 125 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 FER1L5A0AVI2 2057 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 A0A1B0GW15 77 aa12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 CA1P00915 261 aaPredicted RBP12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 RNASE4P34096 147 aaKnown RBP12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 BRCA1P38398 1863 aaKnown RBP12.64□□□□□ -0.39
UBXN2B-201ENST00000399598 A0A1W2PRE2 83 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 NDUFA3O95167 84 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 CEACAM1P13688 526 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 NUTF2P61970 127 aaKnown RBP12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 ZFP36L1Q07352 338 aaKnown RBP12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 SCN4AP35499 1836 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 ARID2Q68CP9 1835 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 FABP5P3A8MUU1 101 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 SMAD7O15105 426 aaKnown RBP12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 TMEM50AO95807 157 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 TYMSP04818 313 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 SPRR3Q9UBC9 169 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 TP53BP1Q12888 1972 aaPredicted RBP12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 SELLP14151 372 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 GLMPQ8WWB7 406 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 OSTCQ9NRP0 149 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 MED13LQ71F56 2210 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 IGKV1-27A0A075B6S5 117 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 PRCDQ00LT1 54 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 TEX38Q6PEX7 206 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 NDUFAF3Q9BU61 184 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 ZNF236Q9UL36 1845 aa12.63□□□□□ -0.39
UBXN2B-201ENST00000399598 GREB1LQ9C091 1923 aaPredicted RBP12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 IGHV1-18A0A0C4DH31 117 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 TCRBV4S1A1TA0A5B7 111 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 PF4P02776 101 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 HEPN1Q6WQI6 88 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 OR10W1Q8NGF6 305 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 MBD3L1Q8WWY6 194 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 FAM168AQ92567 244 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 DUX3Q96PT4 197 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 SPCS1Q9Y6A9 102 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 GREB1Q4ZG55 1949 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 DOCK6Q96HP0 2047 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 TGFAP01135 160 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 PPIFP30405 207 aaKnown RBP12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 NABP1Q96AH0 204 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 DOCK7Q96N67 2140 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 CD5P06127 495 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 C10orf55Q5SWW7 151 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 TMEM105Q8N8V8 129 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 C5orf63A6NC05 138 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 LEPP41159 167 aa12.62□□□□□ -0.39
UBXN2B-201ENST00000399598 FOXF2Q12947 444 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 KIR3DL3Q8N743 410 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 CYTL1Q9NRR1 136 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 PI4KAP42356 2102 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 GFI1BQ5VTD9 330 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 TREML4Q6UXN2 200 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 TOMM7Q9P0U1 55 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 TRAV5A0A0B4J249 113 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 PSPNO60542 156 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 SFTA2Q6UW10 78 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms