RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FNDC4Q9H6D8 234 aaPredicted RBP14.23□□□□□ -0.13
HLA-DQB1-204ENST00000399084 CHD6Q8TD26 2715 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 LOC105371242A0A075B767 164 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 OR7C2O60412 319 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 TRGC1P0CF51 173 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 S100A2P29034 98 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 TNXAQ16473 311 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 MLANAQ16655 118 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 TPTE2P1Q5T6R2 138 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 C10orf113Q5VZT2 155 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 TMEM37Q8WXS4 190 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 SSBP3Q9BWW4 388 aaPredicted RBP14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 ATMQ13315 3056 aa14.22□□□□□ -0.13
HLA-DQB1-204ENST00000399084 HELTA6NFD8 242 aa14.21□□□□□ -0.13
HLA-DQB1-204ENST00000399084 RPL19P84098 196 aaKnown RBP14.21□□□□□ -0.13
HLA-DQB1-204ENST00000399084 CDSNQ15517 529 aa14.21□□□□□ -0.13
HLA-DQB1-204ENST00000399084 OR10G8Q8NGN5 311 aa14.21□□□□□ -0.13
HLA-DQB1-204ENST00000399084 OCC1Q8TAD7 63 aa14.21□□□□□ -0.13
HLA-DQB1-204ENST00000399084 FRZBQ92765 325 aa14.21□□□□□ -0.13
HLA-DQB1-204ENST00000399084 GAR1Q9NY12 217 aaKnown RBP14.21□□□□□ -0.13
HLA-DQB1-204ENST00000399084 ONECUT1Q9UBC0 465 aa14.21□□□□□ -0.13
HLA-DQB1-204ENST00000399084 USP24Q9UPU5 2620 aa14.21□□□□□ -0.13
HLA-DQB1-204ENST00000399084 CHD8Q9HCK8 2581 aa14.21□□□□□ -0.14
HLA-DQB1-204ENST00000399084 GPR6P46095 362 aaPredicted RBP14.21□□□□□ -0.14
HLA-DQB1-204ENST00000399084 COA6Q5JTJ3 125 aaKnown RBP14.21□□□□□ -0.14
HLA-DQB1-204ENST00000399084 C10orf55Q5SWW7 151 aa14.21□□□□□ -0.14
HLA-DQB1-204ENST00000399084 TEX38Q6PEX7 206 aa14.21□□□□□ -0.14
HLA-DQB1-204ENST00000399084 RITA1Q96K30 269 aa14.21□□□□□ -0.14
HLA-DQB1-204ENST00000399084 DERL1Q9BUN8 251 aa14.21□□□□□ -0.14
HLA-DQB1-204ENST00000399084 F11RQ9Y624 299 aaKnown RBP14.21□□□□□ -0.14
HLA-DQB1-204ENST00000399084 ANKHD1Q8IWZ3 2542 aaKnown RBP14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 TRBV20OR9-2A0A075B6H5 130 aa14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 IGKV1D-37A0A075B6S9 117 aa14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 OR10J4P0C629 311 aa14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 PLP1P60201 277 aa14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 C4orf17Q53FE4 359 aa14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 CCDC144NLQ6NUI1 221 aa14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 OR4X1Q8NH49 305 aa14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 ZNF503Q96F45 646 aa14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 FAM167A-AS1Q96KT0 104 aa14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 BAHCC1Q9P281 2608 aa14.2□□□□□ -0.14
HLA-DQB1-204ENST00000399084 MALRD1Q5VYJ5 2156 aa14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 IGHV3-72A0A0B4J1Y9 119 aa14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 A0A1W2PPQ1 181 aa14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 C22orf46C9J442 243 aa14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 COX7A1P24310 79 aa14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 TAS2R60P59551 318 aa14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 NPBQ8NG41 125 aa14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 PERPQ96FX8 193 aa14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 EAF1Q96JC9 268 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 TPSG1Q9NRR2 321 aa14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 TNFRSF19Q9NS68 423 aa14.19□□□□□ -0.14
HLA-DQB1-204ENST00000399084 FABP1P07148 127 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 SOD3P08294 240 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 GATA2P23769 480 aaPredicted RBP14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 TIGITQ495A1 244 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 DNLZQ5SXM8 178 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 BSNQ9UPA5 3926 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 ODF3BA8MYP8 253 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 GNG4P50150 75 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 MINOS1Q5TGZ0 78 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 NECAP1Q8NC96 275 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 SLC25A2Q9BXI2 301 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 MINOS1-NBL1R4GNA1 71 aa14.18□□□□□ -0.14
HLA-DQB1-204ENST00000399084 TEX22C9J3V5 150 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 GOSR1O95249 250 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 UBE2L3P68036 154 aaKnown RBP14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 ACTL10Q5JWF8 245 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 UNQ6494/PRO21346Q6UXR6 183 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 OR5AU1Q8NGC0 362 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 SGMS2Q8NHU3 365 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 SRSF12Q8WXF0 261 aaKnown RBP14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 MISP3Q96FF7 219 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 PAXXQ9BUH6 204 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 OR51M1Q9H341 326 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 ZNF355PQ9NSJ1 428 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 NBEAQ8NFP9 2946 aa14.17□□□□□ -0.14
HLA-DQB1-204ENST00000399084 A6NNC1 897 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 NDUFA3O95167 84 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 MOSP00540 346 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 ARF6P62330 175 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 SUMO1P63165 101 aaKnown RBP14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 COX19Q49B96 90 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 HIST3H2BBQ8N257 126 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 OR5T1Q8NG75 326 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 ELOVL1Q9BW60 279 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 OSTCQ9NRP0 149 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 IL36BQ9NZH7 164 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 SPTA1P02549 2419 aa14.16□□□□□ -0.14
HLA-DQB1-204ENST00000399084 TIMM23O14925 209 aa14.15□□□□□ -0.14
HLA-DQB1-204ENST00000399084 NBR2O15453 112 aa14.15□□□□□ -0.14
HLA-DQB1-204ENST00000399084 CRYBB3P26998 211 aa14.15□□□□□ -0.14
HLA-DQB1-204ENST00000399084 PLGLAQ15195 96 aa14.15□□□□□ -0.14
HLA-DQB1-204ENST00000399084 PATE2Q6UY27 113 aa14.15□□□□□ -0.14
HLA-DQB1-204ENST00000399084 TMEM183AQ8IXX5 376 aa14.15□□□□□ -0.14
HLA-DQB1-204ENST00000399084 FBXL15Q9H469 300 aa14.15□□□□□ -0.14
HLA-DQB1-204ENST00000399084 CDC42EP3Q9UKI2 254 aa14.15□□□□□ -0.14
HLA-DQB1-204ENST00000399084 TMEM8BA6NDV4 472 aa14.15□□□□□ -0.14
HLA-DQB1-204ENST00000399084 ISLRO14498 428 aa14.15□□□□□ -0.14
HLA-DQB1-204ENST00000399084 HYPMO75409 117 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms