RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 Q6ZS92 163 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 DPH3Q96FX2 82 aa13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 RPP21Q9H633 154 aaKnown RBP13.47□□□□□ -0.25
PCDHA12-201ENST00000398631 TRAV14DV4A0A0A6YYC5 116 aa13.46□□□□□ -0.25
PCDHA12-201ENST00000398631 C20orf204Q6ZNR8 217 aa13.46□□□□□ -0.25
PCDHA12-201ENST00000398631 PARD6GQ9BYG4 376 aaPredicted RBP13.46□□□□□ -0.25
PCDHA12-201ENST00000398631 OTORQ9NRC9 128 aa13.46□□□□□ -0.25
PCDHA12-201ENST00000398631 HEPN1Q6WQI6 88 aa13.46□□□□□ -0.25
PCDHA12-201ENST00000398631 OR11H12B2RN74 326 aa13.46□□□□□ -0.26
PCDHA12-201ENST00000398631 DNLZQ5SXM8 178 aa13.46□□□□□ -0.26
PCDHA12-201ENST00000398631 OR11H1Q8NG94 326 aa13.46□□□□□ -0.26
PCDHA12-201ENST00000398631 OR11H2Q8NH07 326 aa13.46□□□□□ -0.26
PCDHA12-201ENST00000398631 TMEM101Q96IK0 257 aa13.46□□□□□ -0.26
PCDHA12-201ENST00000398631 A0A0A6YYD4 124 aa13.46□□□□□ -0.26
PCDHA12-201ENST00000398631 MPZP25189 248 aa13.46□□□□□ -0.26
PCDHA12-201ENST00000398631 IGKV1D-8A0A087WSZ0 117 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 A0A087WWC5 75 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 A0A1B0GW15 77 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 FAM90A9PA6NNJ1 464 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 KCNS1Q96KK3 526 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 SDF2L1Q9HCN8 221 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 MBD3L4A6NDZ8 208 aaPredicted RBP13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 MBD3L3A6NE82 208 aaPredicted RBP13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 MBD3L5A6NJ08 208 aaPredicted RBP13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 CLPSP04118 112 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 FER1L6-AS1Q8NA97 138 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 MBD3L2Q8NHZ7 208 aaPredicted RBP13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 C8orf46Q8TAG6 207 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 TCRBV4S1A1TA0A5B7 111 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 BTCP35070 178 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 ZNF414Q96IQ9 312 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 RNF126Q9BV68 326 aa13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 HEATR1Q9H583 2144 aaKnown RBP13.45□□□□□ -0.26
PCDHA12-201ENST00000398631 SELLP14151 372 aa13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 GAS1P54826 345 aa13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 DOCK8Q8NF50 2099 aa13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 FABP5P3A8MUU1 101 aa13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 SOD3P08294 240 aa13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 GNLYP22749 145 aa13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 SRSF7Q16629 238 aaKnown RBP eCLIP13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 ASCL2Q99929 193 aa13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 LDLRAD2Q5SZI1 272 aa13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 TRGV2A0A075B6R0 118 aa13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 RNASE4P34096 147 aaKnown RBP13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 GFI1Q99684 422 aa13.44□□□□□ -0.26
PCDHA12-201ENST00000398631 MUC21A0A0G2JKD1 596 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 MUC21A0A140T8X8 626 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 TMEM178BH3BS89 294 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 MUC21Q5SSG8 566 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 TMEM170BQ5T4T1 132 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 TMEM167AQ8TBQ9 72 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 KLHDC3Q9BQ90 382 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 A0A0G2JNJ9 132 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 IGHG3P01860 377 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 JOSD1Q15040 202 aaPredicted RBP13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 Q9UFV3 132 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 TRAV9-1A0A075B6T8 112 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 IGHV2-26A0A0B4J1V2 119 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 DUSP14O95147 198 aaKnown RBP13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 LEMD1Q68G75 181 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 ATRXP46100 2492 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 ATP5LO75964 103 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 CD55P08174 381 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 DOCK7Q96N67 2140 aa13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 MRPS16Q9Y3D3 137 aaKnown RBP13.43□□□□□ -0.26
PCDHA12-201ENST00000398631 WDR83OSQ9Y284 106 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 PCNX1Q96RV3 2341 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 PSPNO60542 156 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 LY6G6FQ5SQ64 297 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 TTC28Q96AY4 2481 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 OOSP1A8MZH6 123 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 IGHV1-8P0DP01 117 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 CCL20P78556 96 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 ARL6IP6Q8N6S5 226 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 C18orf15Q96N68 181 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 MSRB2Q9Y3D2 182 aa13.42□□□□□ -0.26
PCDHA12-201ENST00000398631 A0A1W2PRE2 83 aa13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 STHQ8IWL8 128 aa13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 ST6GALNAC3Q8NDV1 305 aa13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 TMEM160Q9NX00 188 aa13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 APOHP02749 345 aaPredicted RBP13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 IGKV1-27A0A075B6S5 117 aa13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 B4DSR2 109 aa13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 HTN3P15516 51 aa13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 EMP1P54849 157 aa13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 F11RQ9Y624 299 aaKnown RBP13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 SRSF6Q13247 344 aaKnown RBP13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 ORMDL3Q8N138 153 aa13.41□□□□□ -0.26
PCDHA12-201ENST00000398631 TRAV41A0A0B4J266 112 aa13.4□□□□□ -0.26
PCDHA12-201ENST00000398631 DPRXA6NFQ7 191 aa13.4□□□□□ -0.26
PCDHA12-201ENST00000398631 H0YIZ8 118 aa13.4□□□□□ -0.26
PCDHA12-201ENST00000398631 PSMG4Q5JS54 123 aa13.4□□□□□ -0.26
PCDHA12-201ENST00000398631 TMEM200BQ69YZ2 307 aa13.4□□□□□ -0.26
PCDHA12-201ENST00000398631 FAM71F2Q6NXP2 309 aa13.4□□□□□ -0.26
PCDHA12-201ENST00000398631 ZNF257Q9Y2Q1 563 aa13.4□□□□□ -0.26
PCDHA12-201ENST00000398631 B3GALT5-AS1P59052 145 aa13.4□□□□□ -0.26
PCDHA12-201ENST00000398631 MINOS1Q5TGZ0 78 aa13.4□□□□□ -0.26
PCDHA12-201ENST00000398631 ATOH7Q8N100 152 aa13.4□□□□□ -0.26
PCDHA12-201ENST00000398631 SCGB3A1Q96QR1 104 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 219.1 ms