RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 RABAC1Q9UI14 185 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 PRNDQ9UKY0 176 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 NSG2Q9Y328 171 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 KNCNA6PVL3 124 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 MT-CO2P00403 227 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 PTHLHP12272 177 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 HSPA13P48723 471 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 AADACL3Q5VUY0 350 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 LYPD1Q8N2G4 141 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 BORCS5Q969J3 196 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 MISP3Q96FF7 219 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 C1QTNF4Q9BXJ3 329 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 VCXQ9H320 206 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 ZFAND3Q9H8U3 227 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 TPRKBQ9Y3C4 175 aa6.71□□□□□ -1.34
NEDD9-203ENST00000397378 IGHV3-66A0A0C4DH42 116 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 TRDV1A0A1B0GX56 115 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 A0A1W2PS18 150 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 RGS10O43665 173 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 KRASP01116 189 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 ZNF688P0C7X2 276 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 GNRHRP30968 328 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 FXYD4P59646 89 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 KRTAP10-2P60368 255 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 KCTD21Q4G0X4 260 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 ACTL10Q5JWF8 245 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 OGFRL1Q5TC84 451 aaPredicted RBP6.7□□□□□ -1.34
NEDD9-203ENST00000397378 TPRA1Q86W33 373 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 HOGA1Q86XE5 327 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 STXBP6Q8NFX7 210 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 DCANP1Q8TF63 244 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 FCAMRQ8WWV6 532 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 NEU1Q99519 415 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 RNF167Q9H6Y7 350 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 MDFICQ9P1T7 246 aa6.7□□□□□ -1.34
NEDD9-203ENST00000397378 PUS1Q9Y606 427 aaKnown RBP eCLIP6.7□□□□□ -1.34
NEDD9-203ENST00000397378 DBX1A6NMT0 343 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 NOTOA8MTQ0 251 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 IGHV3-48P01763 117 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 SPART-AS1P0CW21 52 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 NPPCP23582 126 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 CRYBB3P26998 211 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 FGF9P31371 208 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-203ENST00000397378 G6PCP35575 357 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 LPAR6P43657 344 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 NPBWR1P48145 328 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 FAM3BP58499 235 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-203ENST00000397378 VBP1P61758 197 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 PRSS48Q7RTY5 328 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 TMEM17Q86X19 198 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 ZNF503Q96F45 646 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 NDUFB11Q9NX14 153 aa6.69□□□□□ -1.34
NEDD9-203ENST00000397378 A0A1B0GU03 582 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 TMEM189A5PLL7 270 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 PGLYRP1O75594 196 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-203ENST00000397378 TMEM50AO95807 157 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 RLN1P04808 185 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 P2RY1P47900 373 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 HERV-K104P61576 105 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 NUTF2P61970 127 aaKnown RBP6.68□□□□□ -1.34
NEDD9-203ENST00000397378 POLR2GP62487 172 aaKnown RBP eCLIP6.68□□□□□ -1.34
NEDD9-203ENST00000397378 PRCDQ00LT1 54 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 TBCEQ15813 527 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-203ENST00000397378 FAM122CQ6P4D5 195 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 ZNF705AQ6ZN79 300 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-203ENST00000397378 OR5AP2Q8NGF4 316 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 PINX1Q96BK5 328 aaKnown RBP6.68□□□□□ -1.34
NEDD9-203ENST00000397378 MOB3AQ96BX8 217 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 METTL26Q96S19 204 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 RAB40CQ96S21 281 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 RHBDL2Q9NX52 303 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
NEDD9-203ENST00000397378 A0A0A6YYH2 397 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 TEX48A0A1B0GUV7 120 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 SMIM30A4D0T7 59 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 SMIM9A6NGZ8 99 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 A6NJ64 397 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 ZNF705FA8MVS1 300 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-203ENST00000397378 ZNF705DP0CH99 300 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-203ENST00000397378 ZNF705BP0CI00 300 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-203ENST00000397378 SCAND1P57086 179 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 ERHP84090 104 aaKnown RBP6.67□□□□□ -1.34
NEDD9-203ENST00000397378 OXA1LQ15070 435 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 C22orf42Q6IC83 251 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 DHRS11Q6UWP2 260 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 TSPAN14Q8NG11 270 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 LGALS14Q8TCE9 139 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 SEPSECSQ9HD40 501 aaKnown RBP6.67□□□□□ -1.34
NEDD9-203ENST00000397378 FAM212BQ9NTI7 297 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-203ENST00000397378 XCL2Q9UBD3 114 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 DAPK2Q9UIK4 370 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 TMED3Q9Y3Q3 217 aa6.67□□□□□ -1.34
NEDD9-203ENST00000397378 CHTOPQ9Y3Y2 248 aaKnown RBP6.67□□□□□ -1.34
NEDD9-203ENST00000397378 TRAV18A0A075B6X5 111 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 NBDYA0A0U1RRE5 68 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 HELTA6NFD8 242 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 H3BMM0 161 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 L7N2F9 121 aa6.66□□□□□ -1.34
NEDD9-203ENST00000397378 EIF2B2P49770 351 aaKnown RBP6.66□□□□□ -1.34
NEDD9-203ENST00000397378 HSPE1P61604 102 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms