RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CDIPTO14735 213 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 IAPPP10997 89 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 SELENOVP59797 346 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 ARF6P62330 175 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 SLC35B1P78383 322 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 SLC38A11Q08AI6 406 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 C19orf35Q6ZS72 473 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 FAM19A2Q8N3H0 131 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 DRAM1Q8N682 238 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 CNEP1R1Q8N9A8 125 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 OR4P4Q8NGL7 312 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 DERL1Q9BUN8 251 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 FOXA2Q9Y261 457 aaPredicted RBP4.37□□□□□ -1.71
VPS41-203ENST00000395969 FREM1Q5H8C1 2179 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 MDFIC2A0A1B0GVS7 189 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 C17orf112F2Z3M2 114 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 J3QR06 171 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 TAX1BP3O14907 124 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 ZNF324O75467 553 aaPredicted RBP4.37□□□□□ -1.71
VPS41-203ENST00000395969 S1PR2O95136 353 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 RHOBP62745 196 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 PMCHL1Q16048 86 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 RPRMLQ8N4K4 120 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 NEU4Q8WWR8 484 aaPredicted RBP4.37□□□□□ -1.71
VPS41-203ENST00000395969 VCX2Q9H322 139 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 HEYLQ9NQ87 328 aaPredicted RBP4.37□□□□□ -1.71
VPS41-203ENST00000395969 IL36RNQ9UBH0 155 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 CACNG5Q9UF02 275 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 RPUSD1Q9UJJ7 312 aaKnown RBP4.37□□□□□ -1.71
VPS41-203ENST00000395969 WASHC3Q9Y3C0 194 aa4.37□□□□□ -1.71
VPS41-203ENST00000395969 PRRC2CQ9Y520 2896 aaKnown RBP4.36□□□□□ -1.71
VPS41-203ENST00000395969 ABCA1O95477 2261 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 TRAV38-1A0A0B4J264 116 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 H0YJW9 148 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 K7ERU9 68 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 FCN1O00602 326 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 SNAI2O43623 268 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 RAMP3O60896 148 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 NDUFB4O95168 129 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 IGKV1-5P01602 117 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 HBZP02008 142 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 DUTP33316 252 aaKnown RBP4.36□□□□□ -1.71
VPS41-203ENST00000395969 THBS3P49746 956 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 HLA-DRB5Q30154 266 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 C22orf34Q6ZV56 151 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 LRRC29Q8WV35 223 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 RDH5Q92781 318 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 RAB1CQ92928 201 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 RCHY1Q96PM5 261 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 OR2V2Q96R30 315 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 TXNDC17Q9BRA2 123 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 TPPP3Q9BW30 176 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 GAGE12BA1L429 117 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 LRRC30A6NM36 301 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 LY6LH3BQJ8 138 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 OVOL3O00110 214 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 SIRPB1O00241 398 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 SPINT2O43291 252 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 PROP1O75360 226 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 BRI3O95415 125 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 CA2P00918 260 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 CEACAM3P40198 252 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 ATP5G3P48201 142 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 AMTP48728 403 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 CATR1Q13166 79 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 IZUMO4Q1ZYL8 232 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 ZNF841Q6ZN19 808 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 Q8N7P7 452 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 STXBP6Q8NFX7 210 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 OR5AN1Q8NGI8 311 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 ASCL2Q99929 193 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 QTRT1Q9BXR0 403 aaKnown RBP4.36□□□□□ -1.71
VPS41-203ENST00000395969 IDI2-AS1Q9NZ38 188 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 ZNF580Q9UK33 172 aa4.36□□□□□ -1.71
VPS41-203ENST00000395969 TRAV9-2A0A087WT02 112 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 SNURFLB1AK76 121 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 E7EQL1 145 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 K7EN84 100 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 FCN3O75636 299 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 AGFG2O95081 481 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 MT-ND6P03923 174 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 CRYGBP07316 175 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 FRMD6-AS1P0C7T7 363 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 MALP21145 153 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 GABRA2P47869 451 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 ZNF90Q03938 601 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 DEFB125Q8N687 156 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 OCC1Q8TAD7 63 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 C16orf92Q96LL3 132 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 TMEM147Q9BVK8 224 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 NPCDR1Q9BY65 106 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 TMEM14BQ9NUH8 114 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 LY96Q9Y6Y9 160 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 OOSP1A8MZH6 123 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 CORTO00230 105 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 OR7C2O60412 319 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 MPDU1O75352 247 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 SERPINE2P07093 398 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 IER3P46695 156 aa4.35□□□□□ -1.71
VPS41-203ENST00000395969 RPL24P83731 157 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms