RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 VDAC2P45880 294 aaPredicted RBP13.25□□□□□ -0.29
PCDH1-203ENST00000394536 OR52E5Q8NH55 327 aa13.25□□□□□ -0.29
PCDH1-203ENST00000394536 PERPQ96FX8 193 aa13.25□□□□□ -0.29
PCDH1-203ENST00000394536 SFXN3Q9BWM7 321 aa13.25□□□□□ -0.29
PCDH1-203ENST00000394536 TEX50A0A1B0GTY4 177 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 TMEM177Q53S58 311 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 SSX8Q7RTT4 187 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 TCF24Q7RTU0 167 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 PRSS3P2Q8NHM4 247 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 FAM222BQ8WU58 562 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 CBY1Q9Y3M2 126 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 ZNF891A8MT65 544 aaPredicted RBP13.24□□□□□ -0.29
PCDH1-203ENST00000394536 C15orf65H3BRN8 121 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 HYPMO75409 117 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 TIMM23BQ5SRD1 257 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 CEP295Q9C0D2 2601 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 CBY3A6NI87 242 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 HIGD1CA8MV81 97 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 C16orf97H3BN30 126 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 K7EQM0 130 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 ISLRO14498 428 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 SPRNQ5BIV9 151 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 RPRMLQ8N4K4 120 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 C1orf162Q8NEQ5 155 aaPredicted RBP13.24□□□□□ -0.29
PCDH1-203ENST00000394536 OR4C13Q8NGP0 309 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 WASHC3Q9Y3C0 194 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 NBEAQ8NFP9 2946 aa13.24□□□□□ -0.29
PCDH1-203ENST00000394536 NEU1Q99519 415 aa13.23□□□□□ -0.29
PCDH1-203ENST00000394536 CDX4O14627 284 aaPredicted RBP13.23□□□□□ -0.29
PCDH1-203ENST00000394536 TNFSF13O75888 250 aa13.23□□□□□ -0.29
PCDH1-203ENST00000394536 MMP23AO75900 390 aa13.23□□□□□ -0.29
PCDH1-203ENST00000394536 CRYABP02511 175 aaKnown RBP13.23□□□□□ -0.29
PCDH1-203ENST00000394536 TRBV9A0A0B4J1U6 114 aa13.23□□□□□ -0.29
PCDH1-203ENST00000394536 RPL27AP46776 148 aaKnown RBP13.23□□□□□ -0.29
PCDH1-203ENST00000394536 PRCDQ00LT1 54 aa13.23□□□□□ -0.29
PCDH1-203ENST00000394536 CD69Q07108 199 aa13.23□□□□□ -0.29
PCDH1-203ENST00000394536 ETFRF1Q6IPR1 90 aa13.23□□□□□ -0.29
PCDH1-203ENST00000394536 LOC102724200A0A096LPH7 203 aaPredicted RBP13.22□□□□□ -0.29
PCDH1-203ENST00000394536 PEX7O00628 323 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 PMCHL1Q16048 86 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 FA2HQ7L5A8 372 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 RNF24Q9Y225 148 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 S4R3C0 116 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 ANKHD1Q8IWZ3 2542 aaKnown RBP13.22□□□□□ -0.29
PCDH1-203ENST00000394536 A8MWL6 223 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 ZNF324O75467 553 aaPredicted RBP13.22□□□□□ -0.29
PCDH1-203ENST00000394536 TBR1Q16650 682 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 DNLZQ5SXM8 178 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 ONECUT1Q9UBC0 465 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 NAV3Q8IVL0 2385 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 K7EN84 100 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 LGALS4P56470 323 aa13.22□□□□□ -0.29
PCDH1-203ENST00000394536 TRGV8A0A0C4DH27 118 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 PROP1O75360 226 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 AREGP15514 252 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 COA6Q5JTJ3 125 aaKnown RBP13.21□□□□□ -0.29
PCDH1-203ENST00000394536 C1orf174Q8IYL3 243 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 PMCHL2Q9BQD1 86 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 GNB1LQ9BYB4 327 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 OSTCQ9NRP0 149 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 BTF3P20290 206 aaKnown RBP13.21□□□□□ -0.29
PCDH1-203ENST00000394536 CD40P25942 277 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 RPL15P61313 204 aaKnown RBP13.21□□□□□ -0.29
PCDH1-203ENST00000394536 SELENOTP62341 195 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 UTF1Q5T230 341 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 C1orf185Q5T7R7 199 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 KCNS1Q96KK3 526 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 PLSCR4Q9NRQ2 329 aa13.21□□□□□ -0.29
PCDH1-203ENST00000394536 IGHV1-46P01743 117 aa13.21□□□□□ -0.3
PCDH1-203ENST00000394536 GPX1P07203 203 aa13.21□□□□□ -0.3
PCDH1-203ENST00000394536 KIR3DL3Q8N743 410 aa13.21□□□□□ -0.3
PCDH1-203ENST00000394536 VPS25Q9BRG1 176 aa13.21□□□□□ -0.3
PCDH1-203ENST00000394536 FBXL7Q9UJT9 491 aa13.21□□□□□ -0.3
PCDH1-203ENST00000394536 CDC42EP3Q9UKI2 254 aa13.21□□□□□ -0.3
PCDH1-203ENST00000394536 FOXA2Q9Y261 457 aaPredicted RBP13.21□□□□□ -0.3
PCDH1-203ENST00000394536 SLC25A15Q9Y619 301 aa13.21□□□□□ -0.3
PCDH1-203ENST00000394536 LOC389332A0A1B0GUA5 103 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 CLEC5AQ9NY25 188 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 HCFC1P51610 2035 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 NCBP2LA6PVI3 153 aaKnown RBP13.2□□□□□ -0.3
PCDH1-203ENST00000394536 LEPROTL1O95214 131 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 TDGF1P3P51864 188 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 GUCD1Q96NT3 240 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 RASL11BQ9BPW5 248 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 SLC25A33Q9BSK2 321 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 TMEM208Q9BTX3 173 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 ATG2AQ2TAZ0 1938 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 MBNL2Q5VZF2 373 aaKnown RBP13.2□□□□□ -0.3
PCDH1-203ENST00000394536 GOLT1AQ6ZVE7 132 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 STXBP6Q8NFX7 210 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 OSR1Q8TAX0 266 aaPredicted RBP13.2□□□□□ -0.3
PCDH1-203ENST00000394536 ZNF596Q8TC21 504 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 Q8TCH9 128 aa13.2□□□□□ -0.3
PCDH1-203ENST00000394536 RPUSD1Q9UJJ7 312 aaKnown RBP13.2□□□□□ -0.3
PCDH1-203ENST00000394536 MUC21A0A0G2JKD1 596 aa13.19□□□□□ -0.3
PCDH1-203ENST00000394536 MUC21A0A140T8X8 626 aa13.19□□□□□ -0.3
PCDH1-203ENST00000394536 M0QZ24 198 aa13.19□□□□□ -0.3
PCDH1-203ENST00000394536 SNAI2O43623 268 aa13.19□□□□□ -0.3
PCDH1-203ENST00000394536 C3orf79P0CE67 100 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms