RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 Q6ZR03 302 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 OR4C5Q8NGB2 326 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 BUB1B-PAK6H3BSN5 160 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 WNT2P09544 360 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 MYOD1P15172 320 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 TCF15Q12870 199 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 C1orf147Q96MC9 270 aaPredicted RBP13.62□□□□□ -0.23
SCN3B-202ENST00000392770 A0A087WWC5 75 aa13.61□□□□□ -0.23
SCN3B-202ENST00000392770 C1QTNF9BB2RNN3 333 aa13.61□□□□□ -0.23
SCN3B-202ENST00000392770 SCGB1C2P0DMR2 95 aa13.61□□□□□ -0.23
SCN3B-202ENST00000392770 COL25A1Q9BXS0 654 aaPredicted RBP13.61□□□□□ -0.23
SCN3B-202ENST00000392770 PF4P02776 101 aa13.61□□□□□ -0.23
SCN3B-202ENST00000392770 C1QTNF9P0C862 333 aa13.61□□□□□ -0.23
SCN3B-202ENST00000392770 RPL23P62829 140 aaKnown RBP13.61□□□□□ -0.23
SCN3B-202ENST00000392770 ZFP30Q9Y2G7 519 aa13.61□□□□□ -0.23
SCN3B-202ENST00000392770 C2orf83Q53S99 150 aa13.61□□□□□ -0.23
SCN3B-202ENST00000392770 SRSF4Q08170 494 aaKnown RBP13.61□□□□□ -0.23
SCN3B-202ENST00000392770 IGKV1-6A0A0C4DH72 117 aa13.61□□□□□ -0.23
SCN3B-202ENST00000392770 M0R143 59 aa13.61□□□□□ -0.23
SCN3B-202ENST00000392770 M0R1W7 72 aa13.61□□□□□ -0.23
SCN3B-202ENST00000392770 OR4X2Q8NGF9 303 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 RPP21Q9H633 154 aaKnown RBP13.6□□□□□ -0.23
SCN3B-202ENST00000392770 DKK1O94907 266 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 SCGB1D4Q6XE38 83 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 LHFPL4Q7Z7J7 247 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 GPR82Q96P67 336 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 A0A0G2JRQ6 117 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 IFITM10A6NMD0 228 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 FAM159AQ6UWV7 190 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 MBNL3Q9NUK0 354 aaKnown RBP13.6□□□□□ -0.23
SCN3B-202ENST00000392770 OR4C46A6NHA9 309 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 ANAPC10Q9UM13 185 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 FAM215AQ9Y5M1 114 aa13.6□□□□□ -0.23
SCN3B-202ENST00000392770 NUDT3O95989 172 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 WT1P19544 449 aaPredicted RBP13.59□□□□□ -0.23
SCN3B-202ENST00000392770 A0A1W2PRX2 142 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 GGCTO75223 188 aaKnown RBP13.59□□□□□ -0.23
SCN3B-202ENST00000392770 MGST2Q99735 147 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 PHF3Q92576 2039 aaKnown RBP13.59□□□□□ -0.23
SCN3B-202ENST00000392770 LOC102724200A0A096LPH7 203 aaPredicted RBP13.59□□□□□ -0.23
SCN3B-202ENST00000392770 MBD3L1Q8WWY6 194 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 NPFFR1Q9GZQ6 430 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 TRAV5A0A0B4J249 113 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 ZNF98A6NK75 572 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 CDX1P47902 265 aaPredicted RBP13.59□□□□□ -0.23
SCN3B-202ENST00000392770 GGTLC1Q9BX51 225 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 RFNGQ9Y644 331 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 MINOS1Q5TGZ0 78 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 TMEM167AQ8TBQ9 72 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 AP5S1Q9NUS5 200 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 MOB4Q9Y3A3 225 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 MINOS1-NBL1R4GNA1 71 aa13.59□□□□□ -0.23
SCN3B-202ENST00000392770 LEPROTL1O95214 131 aa13.58□□□□□ -0.23
SCN3B-202ENST00000392770 TAS2R60P59551 318 aa13.58□□□□□ -0.23
SCN3B-202ENST00000392770 TMEM14EPQ6UXP3 125 aa13.58□□□□□ -0.23
SCN3B-202ENST00000392770 TMEM219Q86XT9 240 aa13.58□□□□□ -0.23
SCN3B-202ENST00000392770 GPR61Q9BZJ8 451 aa13.58□□□□□ -0.23
SCN3B-202ENST00000392770 PRSS22Q9GZN4 317 aa13.58□□□□□ -0.23
SCN3B-202ENST00000392770 HEATR5AQ86XA9 2040 aa13.58□□□□□ -0.24
SCN3B-202ENST00000392770 SPATA31B1PQ5VZV4 182 aa13.58□□□□□ -0.24
SCN3B-202ENST00000392770 Q8TCH9 128 aa13.58□□□□□ -0.24
SCN3B-202ENST00000392770 LINC00527Q9UJ94 153 aa13.58□□□□□ -0.24
SCN3B-202ENST00000392770 LYL1P12980 280 aa13.58□□□□□ -0.24
SCN3B-202ENST00000392770 FAM74A4Q5TZK3 123 aa13.58□□□□□ -0.24
SCN3B-202ENST00000392770 SPATA45Q537H7 98 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 C8orf46Q8TAG6 207 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 RNF138Q8WVD3 245 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 IMMP2LQ96T52 175 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 ATG101Q9BSB4 218 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 SNRNP200O75643 2136 aaKnown RBP13.57□□□□□ -0.24
SCN3B-202ENST00000392770 IGLV1-44P01699 117 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 NMUP48645 174 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 RNASE7Q9H1E1 156 aaKnown RBP13.57□□□□□ -0.24
SCN3B-202ENST00000392770 IGLV3-1P01715 115 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 LMO1P25800 156 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 EPDR1Q9UM22 224 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 TMEM8BA6NDV4 472 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 ZNF600Q6ZNG1 722 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 RNF5Q99942 180 aa13.57□□□□□ -0.24
SCN3B-202ENST00000392770 TRAV41A0A0B4J266 112 aa13.56□□□□□ -0.24
SCN3B-202ENST00000392770 MUC21A0A0G2JKD1 596 aa13.56□□□□□ -0.24
SCN3B-202ENST00000392770 MUC21A0A140T8X8 626 aa13.56□□□□□ -0.24
SCN3B-202ENST00000392770 ZNF56Q15929 161 aa13.56□□□□□ -0.24
SCN3B-202ENST00000392770 MUC21Q5SSG8 566 aa13.56□□□□□ -0.24
SCN3B-202ENST00000392770 ZNRD1Q9P1U0 126 aa13.56□□□□□ -0.24
SCN3B-202ENST00000392770 RNASE4P34096 147 aaKnown RBP13.56□□□□□ -0.24
SCN3B-202ENST00000392770 GATA4P43694 442 aa13.56□□□□□ -0.24
SCN3B-202ENST00000392770 TCF24Q7RTU0 167 aa13.56□□□□□ -0.24
SCN3B-202ENST00000392770 TMEM155Q4W5P6 130 aa13.56□□□□□ -0.24
SCN3B-202ENST00000392770 BRD3OSQ6XYD6 125 aa13.56□□□□□ -0.24
SCN3B-202ENST00000392770 ASIPP42127 132 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 UBE2L6O14933 153 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 NPFFO15130 113 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 FAM71F2Q6NXP2 309 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 DUX4L9Q6RFH8 374 aaPredicted RBP13.55□□□□□ -0.24
SCN3B-202ENST00000392770 TMEM183AQ8IXX5 376 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 BPESC1Q9GZL8 116 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 IZUMO1RA6ND01 250 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 OOSP1A8MZH6 123 aa13.55□□□□□ -0.24
SCN3B-202ENST00000392770 ZNF585BQ52M93 769 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms