RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 VAMP2P63027 116 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 CD69Q07108 199 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 ZNF616Q08AN1 781 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 LRRC37A5PQ49AS3 106 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 TMEM14EPQ6UXP3 125 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 RNF126Q9BV68 326 aa11.9□□□□□ -0.5
PDGFB-202ENST00000381551 MRPL36Q9P0J6 103 aaKnown RBP11.9□□□□□ -0.5
PDGFB-202ENST00000381551 PAIP2BQ9ULR5 123 aaKnown RBP11.9□□□□□ -0.5
PDGFB-202ENST00000381551 RPS10-NUDT3A0A1W2PQS6 291 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 PMS2P5A8MQ11 134 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 PPP5D1E7EU14 171 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 BMPR1BO00238 502 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 DEDDO75618 318 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 MPC2O95563 127 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 RLN2P04090 185 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 ETFRF1Q6IPR1 90 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 CACNG8Q8WXS5 425 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 CMYA5Q8N3K9 4069 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 WNK1Q9H4A3 2382 aa11.89□□□□□ -0.51
PDGFB-202ENST00000381551 PRSS46E5RG02 174 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 PF4P02776 101 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 CTSGP08311 255 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 SLC25A4P12235 298 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 GPR183P32249 361 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 ARL3P36405 182 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 Q56UQ5 140 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 PRR31Q5SQ13 230 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 ACSM6Q6P461 480 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 PRSS54Q6PEW0 395 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 LINC00482Q8N8I6 264 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 UBAC2Q8NBM4 344 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 WFDC9Q8NEX5 89 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 OR4X1Q8NH49 305 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 CHAC2Q8WUX2 184 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 ASB13Q8WXK3 278 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 GAR1Q9NY12 217 aaKnown RBP11.88□□□□□ -0.51
PDGFB-202ENST00000381551 OR5AC2Q9NZP5 309 aa11.88□□□□□ -0.51
PDGFB-202ENST00000381551 FAM24AA6NFZ4 105 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 OR2T8A6NH00 312 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 E5RGE8 158 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 TGOLN2O43493 480 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 GGCTO75223 188 aaKnown RBP11.87□□□□□ -0.51
PDGFB-202ENST00000381551 OR2C1O95371 312 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 GIPP09681 153 aaPredicted RBP11.87□□□□□ -0.51
PDGFB-202ENST00000381551 METTL15P1P0C7V9 234 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 ZP3P21754 424 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 HOXD3P31249 432 aaPredicted RBP11.87□□□□□ -0.51
PDGFB-202ENST00000381551 ADMP35318 185 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 NPBWR1P48145 328 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 BCAP31P51572 246 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 SLURP1P55000 103 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 KLF5Q13887 457 aaPredicted RBP11.87□□□□□ -0.51
PDGFB-202ENST00000381551 SPSB3Q6PJ21 355 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 TMEM116Q8NCL8 245 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 BSCL2Q96G97 398 aaPredicted RBP11.87□□□□□ -0.51
PDGFB-202ENST00000381551 CHRDL1Q9BU40 450 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 ZC4H2Q9NQZ6 224 aa11.87□□□□□ -0.51
PDGFB-202ENST00000381551 LYRM2Q9NU23 88 aaPredicted RBP11.87□□□□□ -0.51
PDGFB-202ENST00000381551 CLN5O75503 358 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 CCNKO75909 580 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 P2RY1P47900 373 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 CAV2P51636 162 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 RAP2BP61225 183 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 GAMTQ14353 236 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 SLC16A13Q7RTY0 426 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 HAPLN4Q86UW8 402 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 GPHB5Q86YW7 130 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 TMEM252Q8N6L7 170 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 DLX4Q92988 240 aaPredicted RBP11.86□□□□□ -0.51
PDGFB-202ENST00000381551 PKD1L1Q8TDX9 2849 aa11.86□□□□□ -0.51
PDGFB-202ENST00000381551 GNG7O60262 68 aa11.85□□□□□ -0.51
PDGFB-202ENST00000381551 LYL1P12980 280 aa11.85□□□□□ -0.51
PDGFB-202ENST00000381551 RND2P52198 227 aa11.85□□□□□ -0.51
PDGFB-202ENST00000381551 ARL16Q0P5N6 197 aa11.85□□□□□ -0.51
PDGFB-202ENST00000381551 RPEL1Q2QD12 228 aa11.85□□□□□ -0.51
PDGFB-202ENST00000381551 Q5BKY6 102 aa11.85□□□□□ -0.51
PDGFB-202ENST00000381551 OR8G2PQ6IF36 304 aa11.85□□□□□ -0.51
PDGFB-202ENST00000381551 OR10P1Q8NGE3 313 aa11.85□□□□□ -0.51
PDGFB-202ENST00000381551 DCUN1D4Q92564 292 aa11.85□□□□□ -0.51
PDGFB-202ENST00000381551 NPIPB3Q92617 1050 aa11.85□□□□□ -0.51
PDGFB-202ENST00000381551 TRAV30A0A087WSZ9 112 aa11.84□□□□□ -0.51
PDGFB-202ENST00000381551 TRAV14DV4A0A0A6YYC5 116 aa11.84□□□□□ -0.51
PDGFB-202ENST00000381551 IGSF23A1L1A6 192 aa11.84□□□□□ -0.51
PDGFB-202ENST00000381551 NUPL2O15504 423 aaKnown RBP11.84□□□□□ -0.51
PDGFB-202ENST00000381551 CST7O76096 145 aa11.84□□□□□ -0.51
PDGFB-202ENST00000381551 PET100P0DJ07 73 aa11.84□□□□□ -0.51
PDGFB-202ENST00000381551 SULT1A1P50225 295 aa11.84□□□□□ -0.51
PDGFB-202ENST00000381551 TREML4Q6UXN2 200 aa11.84□□□□□ -0.51
PDGFB-202ENST00000381551 ACY3Q96HD9 319 aa11.84□□□□□ -0.51
PDGFB-202ENST00000381551 ZNF414Q96IQ9 312 aa11.84□□□□□ -0.51
PDGFB-202ENST00000381551 IGKV1-17P01599 117 aa11.83□□□□□ -0.52
PDGFB-202ENST00000381551 IGLC1P0CG04 106 aa11.83□□□□□ -0.52
PDGFB-202ENST00000381551 SYNJ2BPP57105 145 aa11.83□□□□□ -0.52
PDGFB-202ENST00000381551 FGL1Q08830 312 aa11.83□□□□□ -0.52
PDGFB-202ENST00000381551 ACOT7LQ6ZUV0 252 aa11.83□□□□□ -0.52
PDGFB-202ENST00000381551 THAP6Q8TBB0 222 aa11.83□□□□□ -0.52
PDGFB-202ENST00000381551 SLC35E1Q96K37 410 aa11.83□□□□□ -0.52
PDGFB-202ENST00000381551 GGACTQ9BVM4 153 aa11.83□□□□□ -0.52
PDGFB-202ENST00000381551 MBD2Q9UBB5 411 aa11.83□□□□□ -0.52
PDGFB-202ENST00000381551 IGHV3-35A0A0C4DH35 117 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms