RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SSBP3Q9BWW4 388 aaPredicted RBP8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 ONECUT1Q9UBC0 465 aa8.43□□□□□ -1.06
POLR2J3-201ENST00000379340 ACANP16112 2415 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 A0A1W2PPI3 338 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 CD99P14209 185 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 S100PP25815 95 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 RPS10P46783 165 aaKnown RBP8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 UBE2G2P60604 165 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 MRGPRG-AS1Q2M3A8 158 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 FAM78BQ5VT40 261 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 THAP8Q8NA92 274 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 OR1L4Q8NGR5 311 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 C22orf15Q8WYQ4 148 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 OR5B12Q96R08 314 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 PFDN5Q99471 154 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 SIGLEC9Q9Y336 463 aa8.42□□□□□ -1.06
POLR2J3-201ENST00000379340 LOC105371242A0A075B767 164 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 IGKV1OR2-108A0A075B7D4 117 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 C5orf52A6NGY3 159 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 C22orf46C9J442 243 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 H7BYZ3 331 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 UBE2CO00762 179 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 PPP1R2P9O14990 202 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 GOSR1O95249 250 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 CXCL1P09341 107 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 COX7A1P24310 79 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 HTR1DP28221 377 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 ATP5G3P48201 142 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 BPIFB3P59826 476 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 GNB1P62873 340 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 TNXAQ16473 311 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 TPTE2P1Q5T6R2 138 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 ZNF343Q6P1L6 599 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 PPP1R27Q86WC6 154 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 C11orf52Q96A22 123 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 BTF3L4Q96K17 158 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 FAM210BQ96KR6 192 aa8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 SEPSECSQ9HD40 501 aaKnown RBP8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 METTL1Q9UBP6 276 aaKnown RBP8.41□□□□□ -1.06
POLR2J3-201ENST00000379340 ROS1P08922 2347 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 IGHV3-72A0A0B4J1Y9 119 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 TCRBV4S1A1TA0A5B7 111 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 IGLC7A0M8Q6 106 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 A6NNC1 897 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 OOSP1A8MZH6 123 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 E7EUB6 86 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 C19orf84I3L1E1 186 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 CRYGCP07315 174 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 C8orf88P0DMB2 117 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 NPPCP23582 126 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 PRTN3P24158 256 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 GPR6P46095 362 aaPredicted RBP8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 C10orf55Q5SWW7 151 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 SPATA31B1PQ5VZV4 182 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 C16orf82Q7Z2V1 217 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 SSX3Q99909 188 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 DPM3Q9P2X0 92 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 LY96Q9Y6Y9 160 aa8.4□□□□□ -1.06
POLR2J3-201ENST00000379340 TGIF2-C20orf24A0A0A6YYL0 155 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 ODF3BA8MYP8 253 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 AP4M1O00189 453 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 NDUFB4O95168 129 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 IGHV2-5P01817 119 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 S100A8P05109 93 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 SRP14P37108 136 aaKnown RBP8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 SNRPEP62304 92 aaKnown RBP8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 MIR17HGQ75NE6 70 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 LINC00518Q8N0U6 118 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 OR1P1Q8NH06 330 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 OR2T6Q8NHC8 308 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 ACY3Q96HD9 319 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 RITA1Q96K30 269 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 IMMP2LQ96T52 175 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 TCEAL7Q9BRU2 100 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 FNDC4Q9H6D8 234 aaPredicted RBP8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 TPSG1Q9NRR2 321 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 URGCP-MRPS24S4R325 110 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 TNCP24821 2201 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 A0A1W2PRE2 83 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 PSMB11A5LHX3 300 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 C9JCJ5 164 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 PFN1P07737 140 aaKnown RBP8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 COX6B1P14854 86 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 GALR1P47211 349 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 AKR1D1P51857 326 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 EFNA4P52798 201 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 KIAA0141Q14154 515 aaPredicted RBP8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 MLANAQ16655 118 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 KCNIP4Q6PIL6 250 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 LINC01551Q86U37 167 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 OR1L6Q8NGR2 347 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 TRGV9Q99603 122 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 SLC25A33Q9BSK2 321 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 DNAJC4Q9NNZ3 241 aa8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 YTHDF2Q9Y5A9 579 aaKnown RBP8.39□□□□□ -1.07
POLR2J3-201ENST00000379340 ELOA3CA0A087WX78 387 aaPredicted RBP8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 MDFIC2A0A1B0GVS7 189 aa8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 COX7A2P2O60397 106 aa8.38□□□□□ -1.07
POLR2J3-201ENST00000379340 LY6HO94772 140 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms