RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 Q56UQ5 140 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 BSCL2Q96G97 398 aaPredicted RBP14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 ATP6V0BQ99437 205 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 CHRDL1Q9BU40 450 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 C20orf85Q9H1P6 137 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 HIPK2Q9H2X6 1198 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 TBC1D24Q9ULP9 559 aa14.2□□□□□ -0.14
TMEM88B-201ENST00000378821 TENM2Q9NT68 2774 aa14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 A0A1B0GU03 582 aa14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 RBMY1BA6NDE4 496 aaKnown RBP14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 RBMY1EA6NEQ0 496 aaKnown RBP14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 RBMY1DP0C7P1 496 aaKnown RBP14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 ADMP35318 185 aa14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 SUB1P53999 127 aaKnown RBP eCLIP14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 ELLP55199 621 aaPredicted RBP14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 TNFRSF9Q07011 255 aa14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 UNQ9165/PRO28630Q6UXU0 137 aa14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 LYG2Q86SG7 212 aa14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 OR1S1Q8NH92 325 aa14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 WDR89Q96FK6 387 aaPredicted RBP14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 ZNF436Q9C0F3 470 aaPredicted RBP14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 HEYLQ9NQ87 328 aaPredicted RBP14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 HSPB7Q9UBY9 170 aa14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 MLXQ9UH92 298 aa14.19□□□□□ -0.14
TMEM88B-201ENST00000378821 ZNF320A2RRD8 509 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 PITX3O75364 302 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 HOXB5P09067 269 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 MFAP4P55083 255 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 SPSB3Q6PJ21 355 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 TMEM61Q8N0U2 210 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 CACNG8Q8WXS5 425 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 MARC2Q969Z3 335 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 RBKSQ9H477 322 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 CACFD1Q9UGQ2 172 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 TMED3Q9Y3Q3 217 aa14.18□□□□□ -0.14
TMEM88B-201ENST00000378821 DYNC2H1Q8NCM8 4307 aaKnown RBP14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 OR11H12B2RN74 326 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 CORTO00230 105 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 UPK1BO75841 260 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 TCRBP04435 133 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 FCGR2BP31994 310 aaPredicted RBP14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 HTR2BP41595 481 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 C4orf46Q504U0 113 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 GGNBP1Q5YKI7 109 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 DEFB125Q8N687 156 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 UXS1Q8NBZ7 420 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 SLC24A4Q8NFF2 622 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 TMEM170AQ8WVE7 144 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 TMEM190Q8WZ59 177 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 ZNF414Q96IQ9 312 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 FNDC4Q9H6D8 234 aaPredicted RBP14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 PALMDQ9NP74 551 aa14.17□□□□□ -0.14
TMEM88B-201ENST00000378821 TRAV6A0A075B6T7 132 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 TRAV25A0A0B4J276 109 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 CTSGP08311 255 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 SLC25A6P12236 298 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 ASAH1Q13510 395 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 GUCA2BQ16661 112 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 TM4SF20Q53R12 229 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 C2orf83Q53S99 150 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 OR52B4Q8NGK2 314 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 DTD1Q8TEA8 209 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 TXN2Q99757 166 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 NUDT15Q9NV35 164 aa14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 GAR1Q9NY12 217 aaKnown RBP14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 MRPL36Q9P0J6 103 aaKnown RBP14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 MRPL27Q9P0M9 148 aaKnown RBP14.16□□□□□ -0.14
TMEM88B-201ENST00000378821 ADAP1O75689 374 aa14.15□□□□□ -0.14
TMEM88B-201ENST00000378821 OPRK1P41145 380 aa14.15□□□□□ -0.14
TMEM88B-201ENST00000378821 IFITM3Q01628 133 aa14.15□□□□□ -0.14
TMEM88B-201ENST00000378821 COQ8AQ8NI60 647 aa14.15□□□□□ -0.14
TMEM88B-201ENST00000378821 WFDC10AQ9H1F0 79 aa14.15□□□□□ -0.14
TMEM88B-201ENST00000378821 SRD5A3Q9H8P0 318 aa14.15□□□□□ -0.14
TMEM88B-201ENST00000378821 LCE6AA0A183 80 aa14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 MPTX1A8MV57 137 aa14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 NDUFA4O00483 81 aa14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 NUPL2O15504 423 aaKnown RBP14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 GNG7O60262 68 aa14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 NPY1RP25929 384 aa14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 MLANAQ16655 118 aa14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 SLC16A13Q7RTY0 426 aa14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 DUSP18Q8NEJ0 188 aa14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 UFC1Q9Y3C8 167 aa14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 SELENOKQ9Y6D0 94 aa14.14□□□□□ -0.15
TMEM88B-201ENST00000378821 IGHV3OR16-8A0A075B7F1 116 aa14.13□□□□□ -0.15
TMEM88B-201ENST00000378821 FAM240BA0A1B0GVZ2 78 aa14.13□□□□□ -0.15
TMEM88B-201ENST00000378821 ZFAND6Q6FIF0 208 aa14.13□□□□□ -0.15
TMEM88B-201ENST00000378821 MZT2BQ6NZ67 158 aa14.13□□□□□ -0.15
TMEM88B-201ENST00000378821 FAM90A26D6RGX4 464 aa14.12□□□□□ -0.15
TMEM88B-201ENST00000378821 IFNA10P01566 189 aa14.12□□□□□ -0.15
TMEM88B-201ENST00000378821 IAPPP10997 89 aa14.12□□□□□ -0.15
TMEM88B-201ENST00000378821 NPBWR1P48145 328 aa14.12□□□□□ -0.15
TMEM88B-201ENST00000378821 RELQ04864 619 aaPredicted RBP14.12□□□□□ -0.15
TMEM88B-201ENST00000378821 BTNL8Q6UX41 500 aa14.12□□□□□ -0.15
TMEM88B-201ENST00000378821 RNASEH2CQ8TDP1 164 aaKnown RBP14.12□□□□□ -0.15
TMEM88B-201ENST00000378821 MITD1Q8WV92 249 aa14.12□□□□□ -0.15
TMEM88B-201ENST00000378821 C20orf24Q9BUV8 137 aa14.12□□□□□ -0.15
TMEM88B-201ENST00000378821 RETNQ9HD89 108 aa14.12□□□□□ -0.15
TMEM88B-201ENST00000378821 STARD9Q9P2P6 4700 aa14.11□□□□□ -0.15
TMEM88B-201ENST00000378821 ZNF207O43670 478 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms