RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 C15orf61A6NNL5 157 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 M0R1B8 84 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 HSBP1O75506 76 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 CA1P00915 261 aaPredicted RBP13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 FTH1P19P0C7X4 201 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 NPY1RP25929 384 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 PRR20EP86478 221 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 PRR20CP86479 221 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 PRR20DP86480 221 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 PRR20BP86481 221 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 PRR20AP86496 221 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 C17orf58Q2M2W7 97 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 OR4A47Q6IF82 309 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 SLC25A10Q9UBX3 287 aaPredicted RBP13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 LOC102724200A0A096LPH7 203 aaPredicted RBP13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 TNFSF4P23510 183 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 CFHR2P36980 270 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 DUX4L9Q6RFH8 374 aaPredicted RBP13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 PNKDQ8N490 385 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 FAM216AQ8WUB2 273 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 PLEKHA3Q9HB20 300 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 PLCE1Q9P212 2302 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 IGHV2-70DA0A0C4DH43 119 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 IGHV1-69-2A0A0G2JMI3 117 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 OR7C2O60412 319 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 IGLV2-8P01709 118 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 LINC00869P0C866 280 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 SAA2P0DJI9 122 aaPredicted RBP13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 CGB3P0DN86 165 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 CGB7P0DN87 165 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 SEM1Q6ZVN7 128 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 ITLN1Q8WWA0 313 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 LAMA5O15230 3695 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 CNOT1A5YKK6 2376 aaKnown RBP13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 TRGV8A0A0C4DH27 118 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 IGLC7A0M8Q6 106 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 FAM181BA6NEQ2 426 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 M0R2Z0 102 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 IGLL1P15814 213 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 KIR2DS2P43631 304 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 LDLRAD2Q5SZI1 272 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 IGFL2Q6UWQ7 119 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 OR4F17Q8NGA8 305 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 CORO2AQ92828 525 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 NABP2Q9BQ15 211 aa13.55□□□□□ -0.24
PCDHA1-201ENST00000378133 HSPE1P61604 102 aaKnown RBP13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 EBLN2Q6P2I7 272 aa13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 FAM168AQ92567 244 aa13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 SSBP3Q9BWW4 388 aaPredicted RBP13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 TECRQ9NZ01 308 aaKnown RBP13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 DSCAML1Q8TD84 2053 aa13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 GGTLC3B5MD39 225 aa13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 LHBP01229 141 aa13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 PPOXP50336 477 aa13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 Q5PR19 223 aa13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 S100A7AQ86SG5 101 aa13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 SPACA3Q8IXA5 215 aa13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 ENY2Q9NPA8 101 aa13.54□□□□□ -0.24
PCDHA1-201ENST00000378133 VAMP3Q15836 100 aa13.53□□□□□ -0.24
PCDHA1-201ENST00000378133 MUC15Q8N387 334 aa13.53□□□□□ -0.24
PCDHA1-201ENST00000378133 NHLRC2Q8NBF2 726 aa13.53□□□□□ -0.24
PCDHA1-201ENST00000378133 DEFB108BQ8NET1 73 aa13.53□□□□□ -0.24
PCDHA1-201ENST00000378133 ZNF503Q96F45 646 aa13.53□□□□□ -0.24
PCDHA1-201ENST00000378133 TMEM14BQ9NUH8 114 aa13.53□□□□□ -0.24
PCDHA1-201ENST00000378133 ZNF292O60281 2723 aa13.53□□□□□ -0.24
PCDHA1-201ENST00000378133 H0YJW9 148 aa13.53□□□□□ -0.24
PCDHA1-201ENST00000378133 ASPHD1Q5U4P2 390 aa13.53□□□□□ -0.24
PCDHA1-201ENST00000378133 KBTBD11-OT1A0A1B0GTJ5 212 aa13.52□□□□□ -0.24
PCDHA1-201ENST00000378133 BMI1P35226 326 aa13.52□□□□□ -0.24
PCDHA1-201ENST00000378133 OR8B3Q8NGG8 313 aa13.52□□□□□ -0.24
PCDHA1-201ENST00000378133 IGF2BP2-AS1Q96M15 143 aa13.52□□□□□ -0.24
PCDHA1-201ENST00000378133 OR8B2Q96RD0 313 aa13.52□□□□□ -0.24
PCDHA1-201ENST00000378133 IDI2-AS1Q9NZ38 188 aa13.52□□□□□ -0.24
PCDHA1-201ENST00000378133 FOXA2Q9Y261 457 aaPredicted RBP13.52□□□□□ -0.24
PCDHA1-201ENST00000378133 SMG1Q96Q15 3661 aaKnown RBP13.52□□□□□ -0.25
PCDHA1-201ENST00000378133 MAP1BP46821 2468 aaKnown RBP13.52□□□□□ -0.25
PCDHA1-201ENST00000378133 MFAP2P55001 183 aa13.52□□□□□ -0.25
PCDHA1-201ENST00000378133 UBE2G1P62253 170 aa13.52□□□□□ -0.25
PCDHA1-201ENST00000378133 TBR1Q16650 682 aa13.52□□□□□ -0.25
PCDHA1-201ENST00000378133 DEFB109BQ30KR1 87 aa13.52□□□□□ -0.25
PCDHA1-201ENST00000378133 OCIAD2Q56VL3 154 aa13.52□□□□□ -0.25
PCDHA1-201ENST00000378133 NEUROG1Q92886 237 aa13.52□□□□□ -0.25
PCDHA1-201ENST00000378133 MUC6Q6W4X9 2439 aa13.52□□□□□ -0.25
PCDHA1-201ENST00000378133 GATA2P23769 480 aaPredicted RBP13.51□□□□□ -0.25
PCDHA1-201ENST00000378133 RNASEKQ6P5S7 137 aaKnown RBP13.51□□□□□ -0.25
PCDHA1-201ENST00000378133 ZNF474Q6S9Z5 364 aaPredicted RBP13.51□□□□□ -0.25
PCDHA1-201ENST00000378133 MOB3BQ86TA1 216 aa13.51□□□□□ -0.25
PCDHA1-201ENST00000378133 FAM169BQ8N8A8 192 aa13.51□□□□□ -0.25
PCDHA1-201ENST00000378133 TNFRSF14Q92956 283 aa13.51□□□□□ -0.25
PCDHA1-201ENST00000378133 OR51B2Q9Y5P1 312 aa13.51□□□□□ -0.25
PCDHA1-201ENST00000378133 GLRXP35754 106 aa13.51□□□□□ -0.25
PCDHA1-201ENST00000378133 COMMD5Q9GZQ3 224 aa13.51□□□□□ -0.25
PCDHA1-201ENST00000378133 TRAV30A0A087WSZ9 112 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 RPL8P62917 257 aaKnown RBP13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 RPRMLQ8N4K4 120 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 WIPF2Q8TF74 440 aaPredicted RBP13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 CST9LQ9H4G1 147 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 TNFRSF19Q9NS68 423 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 ZNF355PQ9NSJ1 428 aa13.5□□□□□ -0.25
PCDHA1-201ENST00000378133 TANC2Q9HCD6 1990 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms