RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 GDF15Q99988 308 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 IL36BQ9NZH7 164 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 TRBV5-5A0A0J9YX44 114 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 ADMP35318 185 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 GGTLC3B5MD39 225 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
RGP1-201ENST00000378078 HIST1H2BAQ96A08 127 aa13.62□□□□□ -0.23
RGP1-201ENST00000378078 CCL1P22362 96 aa13.61□□□□□ -0.23
RGP1-201ENST00000378078 PINLYPA6NC86 204 aa13.61□□□□□ -0.23
RGP1-201ENST00000378078 NAA38Q9BRA0 125 aaKnown RBP13.61□□□□□ -0.23
RGP1-201ENST00000378078 PGPEP1LA6NFU8 196 aa13.61□□□□□ -0.23
RGP1-201ENST00000378078 C2orf68Q2NKX9 166 aa13.61□□□□□ -0.23
RGP1-201ENST00000378078 ZXDCQ2QGD7 858 aaPredicted RBP13.61□□□□□ -0.23
RGP1-201ENST00000378078 SAXO1Q8IYX7 474 aa13.61□□□□□ -0.23
RGP1-201ENST00000378078 ORMDL3Q8N138 153 aa13.61□□□□□ -0.23
RGP1-201ENST00000378078 RUSC1-AS1Q66K80 236 aa13.61□□□□□ -0.23
RGP1-201ENST00000378078 PLPPR1Q8TBJ4 325 aa13.61□□□□□ -0.23
RGP1-201ENST00000378078 MRPS18AQ9NVS2 196 aaKnown RBP13.61□□□□□ -0.23
RGP1-201ENST00000378078 LRP5O75197 1615 aa13.61□□□□□ -0.23
RGP1-201ENST00000378078 RNF223E7ERA6 249 aa13.6□□□□□ -0.23
RGP1-201ENST00000378078 SLC25A38Q96DW6 304 aa13.6□□□□□ -0.23
RGP1-201ENST00000378078 TM4SF5O14894 197 aa13.6□□□□□ -0.23
RGP1-201ENST00000378078 IRF3Q14653 427 aa13.6□□□□□ -0.23
RGP1-201ENST00000378078 MEGF9Q9H1U4 602 aa13.6□□□□□ -0.23
RGP1-201ENST00000378078 RPUSD1Q9UJJ7 312 aaKnown RBP13.6□□□□□ -0.23
RGP1-201ENST00000378078 F8WEM9 126 aa13.6□□□□□ -0.23
RGP1-201ENST00000378078 DMRT1Q9Y5R6 373 aa13.6□□□□□ -0.23
RGP1-201ENST00000378078 IGHV1-18A0A0C4DH31 117 aa13.6□□□□□ -0.23
RGP1-201ENST00000378078 MBNL3Q9NUK0 354 aaKnown RBP13.6□□□□□ -0.23
RGP1-201ENST00000378078 SCRT1Q9BWW7 348 aa13.59□□□□□ -0.23
RGP1-201ENST00000378078 PATJQ8NI35 1801 aa13.59□□□□□ -0.23
RGP1-201ENST00000378078 DDTP30046 118 aa13.59□□□□□ -0.23
RGP1-201ENST00000378078 TRAV13-1A0A0B4J241 112 aa13.59□□□□□ -0.23
RGP1-201ENST00000378078 GZMMP51124 257 aa13.59□□□□□ -0.23
RGP1-201ENST00000378078 EXOC3-AS1Q8N2X6 119 aa13.59□□□□□ -0.23
RGP1-201ENST00000378078 TMEM86BQ8N661 226 aa13.59□□□□□ -0.23
RGP1-201ENST00000378078 H3BUX3 64 aa13.59□□□□□ -0.23
RGP1-201ENST00000378078 M0R2P5 195 aa13.59□□□□□ -0.23
RGP1-201ENST00000378078 TRAV41A0A0B4J266 112 aa13.59□□□□□ -0.23
RGP1-201ENST00000378078 PEF1Q9UBV8 284 aaKnown RBP13.59□□□□□ -0.23
RGP1-201ENST00000378078 PIN1P1O15428 100 aa13.58□□□□□ -0.23
RGP1-201ENST00000378078 PRTN3P24158 256 aa13.58□□□□□ -0.23
RGP1-201ENST00000378078 RNF125Q96EQ8 232 aa13.58□□□□□ -0.23
RGP1-201ENST00000378078 MESP1Q9BRJ9 268 aa13.58□□□□□ -0.24
RGP1-201ENST00000378078 A0A087WWL8 130 aa13.58□□□□□ -0.24
RGP1-201ENST00000378078 GPX4P36969 197 aaPredicted RBP13.58□□□□□ -0.24
RGP1-201ENST00000378078 C1QL4Q86Z23 238 aa13.58□□□□□ -0.24
RGP1-201ENST00000378078 ZNF114Q8NC26 417 aa13.58□□□□□ -0.24
RGP1-201ENST00000378078 FABP5P3A8MUU1 101 aa13.58□□□□□ -0.24
RGP1-201ENST00000378078 GCM2O75603 506 aaPredicted RBP13.58□□□□□ -0.24
RGP1-201ENST00000378078 NAPSAO96009 420 aa13.58□□□□□ -0.24
RGP1-201ENST00000378078 SRSF1Q07955 248 aaKnown RBP eCLIP13.58□□□□□ -0.24
RGP1-201ENST00000378078 CLPSL2Q6UWE3 100 aa13.58□□□□□ -0.24
RGP1-201ENST00000378078 POC1AQ8NBT0 407 aa13.58□□□□□ -0.24
RGP1-201ENST00000378078 CFHR5Q9BXR6 569 aa13.58□□□□□ -0.24
RGP1-201ENST00000378078 TMEM133Q9H2Q1 129 aa13.58□□□□□ -0.24
RGP1-201ENST00000378078 CEACAM8P31997 349 aaPredicted RBP13.58□□□□□ -0.24
RGP1-201ENST00000378078 KLF17Q5JT82 389 aaPredicted RBP13.58□□□□□ -0.24
RGP1-201ENST00000378078 HOXB1P14653 301 aaPredicted RBP13.58□□□□□ -0.24
RGP1-201ENST00000378078 F5H768 121 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 DANCRP0C864 163 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 ZNF562Q6V9R5 426 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 GGACTQ9BVM4 153 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 C19orf67A6NJJ6 358 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 Q0VFX4 171 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 ZNF876PQ49A33 203 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 RCC1LQ96I51 464 aaKnown RBP13.57□□□□□ -0.24
RGP1-201ENST00000378078 NHSL1Q5SYE7 1610 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 FAM90A26D6RGX4 464 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 SELLP14151 372 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
RGP1-201ENST00000378078 F8VVB4 439 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 F8VWA3 439 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 DUSP14O95147 198 aaKnown RBP13.56□□□□□ -0.24
RGP1-201ENST00000378078 C15orf32Q32M92 178 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 OSR1Q8TAX0 266 aaPredicted RBP13.56□□□□□ -0.24
RGP1-201ENST00000378078 LINC00312Q9Y6C7 94 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 LY75O60449 1722 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 TRGV11A0A075B6L2 103 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 STAG3L3P0CL85 134 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 C1orf159Q96HA4 380 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 HOXD3P31249 432 aaPredicted RBP13.56□□□□□ -0.24
RGP1-201ENST00000378078 ZNF525Q8N782 197 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 NEUROG1Q92886 237 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 Q96MF0 132 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 OTORQ9NRC9 128 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 LOC285556D6RIA3 1793 aa13.56□□□□□ -0.24
RGP1-201ENST00000378078 TCRAP04437 139 aa13.55□□□□□ -0.24
RGP1-201ENST00000378078 OR9G9P0C7N8 305 aa13.55□□□□□ -0.24
RGP1-201ENST00000378078 CLDN16Q9Y5I7 305 aa13.55□□□□□ -0.24
RGP1-201ENST00000378078 TRBV9A0A0B4J1U6 114 aa13.55□□□□□ -0.24
RGP1-201ENST00000378078 IZUMO1RA6ND01 250 aa13.55□□□□□ -0.24
RGP1-201ENST00000378078 NDUFS5O43920 106 aa13.55□□□□□ -0.24
RGP1-201ENST00000378078 C10orf55Q5SWW7 151 aa13.55□□□□□ -0.24
RGP1-201ENST00000378078 TRBV5-7A0A0A0MS05 114 aa13.55□□□□□ -0.24
RGP1-201ENST00000378078 MBD3L4A6NDZ8 208 aaPredicted RBP13.55□□□□□ -0.24
RGP1-201ENST00000378078 MBD3L3A6NE82 208 aaPredicted RBP13.55□□□□□ -0.24
RGP1-201ENST00000378078 MBD3L5A6NJ08 208 aaPredicted RBP13.55□□□□□ -0.24
RGP1-201ENST00000378078 IGHMP01871 453 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms