RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 TMEM217Q8N7C4 229 aa15.54■□□□□ 0.08
VSX1-201ENST00000376707 DUSP18Q8NEJ0 188 aa15.54■□□□□ 0.08
VSX1-201ENST00000376707 OR4C16Q8NGL9 310 aa15.54■□□□□ 0.08
VSX1-201ENST00000376707 GLYATL2Q8WU03 294 aa15.54■□□□□ 0.08
VSX1-201ENST00000376707 LINC00476Q8WZB0 136 aa15.54■□□□□ 0.08
VSX1-201ENST00000376707 PDCD10Q9BUL8 212 aa15.54■□□□□ 0.08
VSX1-201ENST00000376707 C14orf166Q9Y224 244 aaKnown RBP15.54■□□□□ 0.08
VSX1-201ENST00000376707 H3BMQ9 156 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 GSTZ1O43708 216 aaPredicted RBP15.53■□□□□ 0.08
VSX1-201ENST00000376707 OR5AC1P0C628 307 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 ETV6P41212 452 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 PAFAH1B2P68402 229 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 TOMM20LQ6UXN7 152 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 Q6ZRM9 215 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 FAM219AQ8IW50 185 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 GBGT1Q8N5D6 347 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 PRRT1Q99946 306 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 NAA60Q9H7X0 242 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 GPR132Q9UNW8 380 aa15.53■□□□□ 0.08
VSX1-201ENST00000376707 BIRC6Q9NR09 4857 aa15.52■□□□□ 0.08
VSX1-201ENST00000376707 TEX13DA0A0J9YY54 714 aaPredicted RBP15.52■□□□□ 0.08
VSX1-201ENST00000376707 ANKRD20A5PA0PJZ0 165 aa15.52■□□□□ 0.08
VSX1-201ENST00000376707 CORTO00230 105 aa15.52■□□□□ 0.08
VSX1-201ENST00000376707 CD5P06127 495 aa15.52■□□□□ 0.08
VSX1-201ENST00000376707 RNASE2P10153 161 aaKnown RBP15.52■□□□□ 0.08
VSX1-201ENST00000376707 SUB1P53999 127 aaKnown RBP eCLIP15.52■□□□□ 0.08
VSX1-201ENST00000376707 ZNF124Q15973 351 aa15.52■□□□□ 0.08
VSX1-201ENST00000376707 FAM90A2PQ658T7 463 aa15.52■□□□□ 0.08
VSX1-201ENST00000376707 TCF24Q7RTU0 167 aa15.52■□□□□ 0.08
VSX1-201ENST00000376707 LHFPL5Q8TAF8 219 aa15.52■□□□□ 0.08
VSX1-201ENST00000376707 SOSTQ9BQB4 213 aa15.52■□□□□ 0.08
VSX1-201ENST00000376707 CSTL1Q9H114 145 aa15.52■□□□□ 0.08
VSX1-201ENST00000376707 RSL24D1Q9UHA3 163 aaKnown RBP15.52■□□□□ 0.08
VSX1-201ENST00000376707 PLECQ15149 4684 aaKnown RBP15.52■□□□□ 0.07
VSX1-201ENST00000376707 LY6G6CO95867 125 aa15.51■□□□□ 0.07
VSX1-201ENST00000376707 ATF4P18848 351 aaPredicted RBP15.51■□□□□ 0.07
VSX1-201ENST00000376707 HOXA1P49639 335 aaPredicted RBP15.51■□□□□ 0.07
VSX1-201ENST00000376707 DHODHQ02127 395 aa15.51■□□□□ 0.07
VSX1-201ENST00000376707 BSXQ3C1V8 233 aa15.51■□□□□ 0.07
VSX1-201ENST00000376707 CEMP1Q6PRD7 247 aaPredicted RBP15.51■□□□□ 0.07
VSX1-201ENST00000376707 ZNF600Q6ZNG1 722 aa15.51■□□□□ 0.07
VSX1-201ENST00000376707 OR51S1Q8NGJ8 323 aa15.51■□□□□ 0.07
VSX1-201ENST00000376707 OR52E5Q8NH55 327 aa15.51■□□□□ 0.07
VSX1-201ENST00000376707 RNASE11Q8TAA1 199 aaKnown RBP15.51■□□□□ 0.07
VSX1-201ENST00000376707 RBPMSQ93062 196 aaKnown RBP15.51■□□□□ 0.07
VSX1-201ENST00000376707 ENY2Q9NPA8 101 aa15.51■□□□□ 0.07
VSX1-201ENST00000376707 PUS1Q9Y606 427 aaKnown RBP eCLIP15.51■□□□□ 0.07
VSX1-201ENST00000376707 ALMS1Q8TCU4 4167 aa15.5■□□□□ 0.07
VSX1-201ENST00000376707 CRYM-AS1A6NIL9 109 aa15.5■□□□□ 0.07
VSX1-201ENST00000376707 MPTX1A8MV57 137 aa15.5■□□□□ 0.07
VSX1-201ENST00000376707 NOL3O60936 208 aaKnown RBP15.5■□□□□ 0.07
VSX1-201ENST00000376707 SPCS3P61009 180 aa15.5■□□□□ 0.07
VSX1-201ENST00000376707 SELENOHQ8IZQ5 122 aaKnown RBP15.5■□□□□ 0.07
VSX1-201ENST00000376707 ST8SIA2Q92186 375 aa15.5■□□□□ 0.07
VSX1-201ENST00000376707 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.5■□□□□ 0.07
VSX1-201ENST00000376707 KLK5Q9Y337 293 aaPredicted RBP15.5■□□□□ 0.07
VSX1-201ENST00000376707 DNASE2O00115 360 aaPredicted RBP15.49■□□□□ 0.07
VSX1-201ENST00000376707 TMEM50AO95807 157 aa15.49■□□□□ 0.07
VSX1-201ENST00000376707 TNFSF8P32971 234 aa15.49■□□□□ 0.07
VSX1-201ENST00000376707 RPL11P62913 178 aaKnown RBP15.49■□□□□ 0.07
VSX1-201ENST00000376707 VSIRQ9H7M9 311 aa15.49■□□□□ 0.07
VSX1-201ENST00000376707 ZFAND3Q9H8U3 227 aa15.49■□□□□ 0.07
VSX1-201ENST00000376707 TMEM56-RWDD3S4R434 201 aa15.49■□□□□ 0.07
VSX1-201ENST00000376707 IGHV3-66A0A0C4DH42 116 aa15.48■□□□□ 0.07
VSX1-201ENST00000376707 APOHP02749 345 aaPredicted RBP15.48■□□□□ 0.07
VSX1-201ENST00000376707 GATAD1Q8WUU5 269 aa15.48■□□□□ 0.07
VSX1-201ENST00000376707 MS4A6AQ9H2W1 248 aa15.48■□□□□ 0.07
VSX1-201ENST00000376707 TMEM231Q9H6L2 316 aa15.48■□□□□ 0.07
VSX1-201ENST00000376707 FABP12A6NFH5 140 aa15.47■□□□□ 0.07
VSX1-201ENST00000376707 SCGB2A1O75556 95 aa15.47■□□□□ 0.07
VSX1-201ENST00000376707 DFFBO76075 338 aa15.47■□□□□ 0.07
VSX1-201ENST00000376707 OPRK1P41145 380 aa15.47■□□□□ 0.07
VSX1-201ENST00000376707 LILRB2Q8N423 598 aa15.47■□□□□ 0.07
VSX1-201ENST00000376707 MCFD2Q8NI22 146 aa15.47■□□□□ 0.07
VSX1-201ENST00000376707 RARRES2Q99969 163 aa15.47■□□□□ 0.07
VSX1-201ENST00000376707 FNDC4Q9H6D8 234 aaPredicted RBP15.47■□□□□ 0.07
VSX1-201ENST00000376707 SCP2D1Q9UJQ7 156 aa15.47■□□□□ 0.07
VSX1-201ENST00000376707 A0A1B0GU03 582 aa15.46■□□□□ 0.07
VSX1-201ENST00000376707 TMEM268Q5VZI3 342 aa15.46■□□□□ 0.07
VSX1-201ENST00000376707 OR4X1Q8NH49 305 aa15.46■□□□□ 0.07
VSX1-201ENST00000376707 IL22RA2Q969J5 263 aa15.46■□□□□ 0.07
VSX1-201ENST00000376707 TMEM230Q96A57 120 aa15.46■□□□□ 0.07
VSX1-201ENST00000376707 GPR146Q96CH1 333 aa15.46■□□□□ 0.07
VSX1-201ENST00000376707 SCGB3A2Q96PL1 93 aa15.46■□□□□ 0.07
VSX1-201ENST00000376707 MRPL36Q9P0J6 103 aaKnown RBP15.46■□□□□ 0.07
VSX1-201ENST00000376707 CACNG5Q9UF02 275 aa15.46■□□□□ 0.07
VSX1-201ENST00000376707 TRAV2A0A0B4J234 112 aa15.45■□□□□ 0.06
VSX1-201ENST00000376707 CLN5O75503 358 aa15.45■□□□□ 0.06
VSX1-201ENST00000376707 NPPCP23582 126 aa15.45■□□□□ 0.06
VSX1-201ENST00000376707 HTR2BP41595 481 aa15.45■□□□□ 0.06
VSX1-201ENST00000376707 DEFB131AP59861 70 aa15.45■□□□□ 0.06
VSX1-201ENST00000376707 CACFD1Q9UGQ2 172 aa15.45■□□□□ 0.06
VSX1-201ENST00000376707 RABAC1Q9UI14 185 aa15.45■□□□□ 0.06
VSX1-201ENST00000376707 KCNIP3Q9Y2W7 256 aa15.45■□□□□ 0.06
VSX1-201ENST00000376707 A0A1W2PS18 150 aa15.44■□□□□ 0.06
VSX1-201ENST00000376707 CA1P00915 261 aaPredicted RBP15.44■□□□□ 0.06
VSX1-201ENST00000376707 TMEM187Q14656 261 aa15.44■□□□□ 0.06
VSX1-201ENST00000376707 LEMD1Q68G75 181 aa15.44■□□□□ 0.06
VSX1-201ENST00000376707 OR11H2Q8NH07 326 aa15.44■□□□□ 0.06
VSX1-201ENST00000376707 PHLDA1Q8WV24 401 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms