RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 DSCAMO60469 2012 aa9.57□□□□□ -0.88
DDR1-227ENST00000376570 SERTM2A0A1B0GWG4 89 aa9.57□□□□□ -0.88
DDR1-227ENST00000376570 HELTA6NFD8 242 aa9.57□□□□□ -0.88
DDR1-227ENST00000376570 C1orf229Q6ZS94 237 aaPredicted RBP9.57□□□□□ -0.88
DDR1-227ENST00000376570 MBNL3Q9NUK0 354 aaKnown RBP9.57□□□□□ -0.88
DDR1-227ENST00000376570 HSPB7Q9UBY9 170 aa9.57□□□□□ -0.88
DDR1-227ENST00000376570 ZBTB34Q8NCN2 500 aa9.57□□□□□ -0.88
DDR1-227ENST00000376570 OR2D3Q8NGH3 330 aa9.57□□□□□ -0.88
DDR1-227ENST00000376570 GAFA1Q96PS6 74 aa9.57□□□□□ -0.88
DDR1-227ENST00000376570 WNT10AQ9GZT5 417 aa9.57□□□□□ -0.88
DDR1-227ENST00000376570 IL3RAP26951 378 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 RPL19P84098 196 aaKnown RBP9.56□□□□□ -0.88
DDR1-227ENST00000376570 DMRTA1Q5VZB9 504 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 E7EQL1 145 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 ZNF253O75346 499 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 PROP1O75360 226 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 LY6EQ16553 131 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 ODF3L1Q8IXM7 274 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 ZNF114Q8NC26 417 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 OR5B3Q8NH48 314 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 BORCS7Q96B45 105 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 MGST2Q99735 147 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 SMDT1Q9H4I9 107 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 IL19Q9UHD0 177 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 MBD3L4A6NDZ8 208 aaPredicted RBP9.56□□□□□ -0.88
DDR1-227ENST00000376570 MBD3L3A6NE82 208 aaPredicted RBP9.56□□□□□ -0.88
DDR1-227ENST00000376570 MBD3L5A6NJ08 208 aaPredicted RBP9.56□□□□□ -0.88
DDR1-227ENST00000376570 SUB1P53999 127 aaKnown RBP eCLIP9.56□□□□□ -0.88
DDR1-227ENST00000376570 TPPP2P59282 170 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 ATP6V1FQ16864 119 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 IGFL4Q6B9Z1 124 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 Q6ZN92 141 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 MBD3L2Q8NHZ7 208 aaPredicted RBP9.56□□□□□ -0.88
DDR1-227ENST00000376570 ZNF586Q9NXT0 402 aa9.56□□□□□ -0.88
DDR1-227ENST00000376570 EXPH5Q8NEV8 1989 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 SSBP2P81877 361 aaPredicted RBP9.55□□□□□ -0.88
DDR1-227ENST00000376570 FAM19A2Q8N3H0 131 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 OR1L6Q8NGR2 347 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 PRNDQ9UKY0 176 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 GOLT1BQ9Y3E0 138 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 PGPA6NDG6 321 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 AREGP15514 252 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 GCHFRP30047 84 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 GPR6P46095 362 aaPredicted RBP9.55□□□□□ -0.88
DDR1-227ENST00000376570 RPL27AP46776 148 aaKnown RBP9.55□□□□□ -0.88
DDR1-227ENST00000376570 COL25A1Q9BXS0 654 aaPredicted RBP9.55□□□□□ -0.88
DDR1-227ENST00000376570 FOXA3P55318 350 aaPredicted RBP9.55□□□□□ -0.88
DDR1-227ENST00000376570 C10orf113Q5VZT2 155 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 MAPK1IP1LQ8NDC0 245 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 DEFB104AQ8WTQ1 72 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 RITA1Q96K30 269 aa9.55□□□□□ -0.88
DDR1-227ENST00000376570 CT45A6P0DMU7 189 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 CT45A5P0DMU8 189 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 CT45A7P0DMV0 189 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 CCKARP32238 428 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 HINT1P49773 126 aaPredicted RBP9.54□□□□□ -0.88
DDR1-227ENST00000376570 JOSD1Q15040 202 aaPredicted RBP9.54□□□□□ -0.88
DDR1-227ENST00000376570 Q8TCH9 128 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 ZNF430Q9H8G1 570 aaPredicted RBP9.54□□□□□ -0.88
DDR1-227ENST00000376570 ZNF331Q9NQX6 463 aaPredicted RBP9.54□□□□□ -0.88
DDR1-227ENST00000376570 A0A087WWC5 75 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 CBY3A6NI87 242 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 TAS2R45P59539 299 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 RELBQ01201 579 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 KRTAP27-1Q3LI81 207 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 TEX38Q6PEX7 206 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 TMEM14EPQ6UXP3 125 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 C1orf162Q8NEQ5 155 aaPredicted RBP9.54□□□□□ -0.88
DDR1-227ENST00000376570 OCC1Q8TAD7 63 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 SLC25A33Q9BSK2 321 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 NDUFAF3Q9BU61 184 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 GGTLC1Q9BX51 225 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 FN1P02751 2386 aaKnown RBP9.54□□□□□ -0.88
DDR1-227ENST00000376570 HNRNPA3P51991 378 aaKnown RBP9.54□□□□□ -0.88
DDR1-227ENST00000376570 BRWD1-AS2P59051 145 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 VAMP3Q15836 100 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 C17orf58Q2M2W7 97 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 CENPWQ5EE01 88 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 RNASEKQ6P5S7 137 aaKnown RBP9.54□□□□□ -0.88
DDR1-227ENST00000376570 SSBP4Q9BWG4 385 aaPredicted RBP9.54□□□□□ -0.88
DDR1-227ENST00000376570 ARL2-SNX15V9GYD0 113 aa9.54□□□□□ -0.88
DDR1-227ENST00000376570 C15orf65H3BRN8 121 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 CXorf1O96002 111 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 MFAP2P55001 183 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 CYP2G1PQ6ZSU1 146 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 PRNTQ86SH4 94 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 C11orf42Q8N5U0 333 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 OR8B3Q8NGG8 313 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 OR8B2Q96RD0 313 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 TRAV8-1A0A0A6YYK1 113 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 TEX50A0A1B0GTY4 177 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 HSBP1O75506 76 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 RAB4AP20338 218 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 TIMP3P35625 211 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 EFNB3Q15768 340 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 ZNF295-AS1Q8N0V1 137 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 ZCCHC14Q8WYQ9 949 aaKnown RBP9.53□□□□□ -0.88
DDR1-227ENST00000376570 CORO2AQ92828 525 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 ST6GALNAC6Q969X2 333 aa9.53□□□□□ -0.88
DDR1-227ENST00000376570 AGMATQ9BSE5 352 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms