RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 COL4A6Q14031 1691 aa16.19■□□□□ 0.18
TGFBR1-201ENST00000374990 PSMB2P49721 201 aa16.19■□□□□ 0.18
TGFBR1-201ENST00000374990 OCC1Q8TAD7 63 aa16.19■□□□□ 0.18
TGFBR1-201ENST00000374990 PMCHL2Q9BQD1 86 aa16.19■□□□□ 0.18
TGFBR1-201ENST00000374990 CIDEAO60543 219 aa16.19■□□□□ 0.18
TGFBR1-201ENST00000374990 OTORQ9NRC9 128 aa16.19■□□□□ 0.18
TGFBR1-201ENST00000374990 FAM169BQ8N8A8 192 aa16.19■□□□□ 0.18
TGFBR1-201ENST00000374990 DOCK9Q9BZ29 2069 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 TFF1P04155 84 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 Q9H3A6 140 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 GPX1P07203 203 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 C5orf52A6NGY3 159 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 COX6B1P14854 86 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 TSPOP30536 169 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 MBD3L4A6NDZ8 208 aaPredicted RBP16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 MBD3L3A6NE82 208 aaPredicted RBP16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 MBD3L5A6NJ08 208 aaPredicted RBP16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 NPIPB6E9PJ23 425 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 MBD3L2Q8NHZ7 208 aaPredicted RBP16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 ZNF502Q8TBZ5 544 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 TCF21O43680 179 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 ERASQ7Z444 233 aa16.18■□□□□ 0.18
TGFBR1-201ENST00000374990 FOXI3A8MTJ6 420 aaPredicted RBP16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 CYB5R2Q6BCY4 276 aa16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 EPDR1Q9UM22 224 aa16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 ZCCHC24Q8N2G6 241 aaKnown RBP16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 PRDM13Q9H4Q3 707 aa16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 MBNL3Q9NUK0 354 aaKnown RBP16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 OR4C46A6NHA9 309 aa16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 PCNX2A6NKB5 2137 aa16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 HIGD1CA8MV81 97 aa16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 HERPUD1Q15011 391 aa16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 TFPI2P48307 235 aa16.17■□□□□ 0.18
TGFBR1-201ENST00000374990 M0R3E3 92 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 NUDT3O95989 172 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 GCSAMLQ5JQS6 135 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 A0A0G2JLM5 398 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 GAGE10A6NGK3 116 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 PARD6GQ9BYG4 376 aaPredicted RBP16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 CD177Q8N6Q3 437 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 COQ2Q96H96 371 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 LILRA1O75019 489 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 IGKV3-15P01624 115 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 TRGV3P03979 118 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 FOXL1Q12952 345 aa16.16■□□□□ 0.18
TGFBR1-201ENST00000374990 JOSD1Q15040 202 aaPredicted RBP16.15■□□□□ 0.18
TGFBR1-201ENST00000374990 ZNF524Q96C55 264 aa16.15■□□□□ 0.18
TGFBR1-201ENST00000374990 ZNF581Q9P0T4 197 aa16.15■□□□□ 0.18
TGFBR1-201ENST00000374990 SERF1AO75920 110 aa16.15■□□□□ 0.18
TGFBR1-201ENST00000374990 KCNS1Q96KK3 526 aa16.15■□□□□ 0.18
TGFBR1-201ENST00000374990 OR1N2Q8NGR9 330 aa16.15■□□□□ 0.18
TGFBR1-201ENST00000374990 PRELID3AQ96N28 172 aa16.15■□□□□ 0.18
TGFBR1-201ENST00000374990 RNASE7Q9H1E1 156 aaKnown RBP16.15■□□□□ 0.18
TGFBR1-201ENST00000374990 TRBV20OR9-2A0A075B6H5 130 aa16.15■□□□□ 0.18
TGFBR1-201ENST00000374990 SELLP14151 372 aa16.15■□□□□ 0.18
TGFBR1-201ENST00000374990 PPP1R17O96001 155 aa16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 RNF125Q96EQ8 232 aa16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 COTL1Q14019 142 aa16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 FAM53AQ6NSI3 398 aaPredicted RBP16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 DDB2Q92466 427 aa16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 GNB1LQ9BYB4 327 aa16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 C9JCJ5 164 aa16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 FABP2P12104 132 aa16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 ATOH7Q8N100 152 aa16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 HELZP42694 1942 aaKnown RBP16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 ZNF414Q96IQ9 312 aa16.14■□□□□ 0.17
TGFBR1-201ENST00000374990 GPR183P32249 361 aa16.13■□□□□ 0.17
TGFBR1-201ENST00000374990 LY6EQ16553 131 aa16.13■□□□□ 0.17
TGFBR1-201ENST00000374990 LINC01551Q86U37 167 aa16.13■□□□□ 0.17
TGFBR1-201ENST00000374990 MLNRO43193 412 aa16.13■□□□□ 0.17
TGFBR1-201ENST00000374990 ZNF207O43670 478 aaKnown RBP16.13■□□□□ 0.17
TGFBR1-201ENST00000374990 TMEM167AQ8TBQ9 72 aa16.13■□□□□ 0.17
TGFBR1-201ENST00000374990 DOCK10Q96BY6 2186 aa16.13■□□□□ 0.17
TGFBR1-201ENST00000374990 NDUFAF3Q9BU61 184 aa16.13■□□□□ 0.17
TGFBR1-201ENST00000374990 KIR2DL4Q99706 377 aa16.13■□□□□ 0.17
TGFBR1-201ENST00000374990 NRN1Q9NPD7 142 aa16.13■□□□□ 0.17
TGFBR1-201ENST00000374990 LINC00587B1AMM8 73 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 ITGB1BP1O14713 200 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 PAPPA-AS1Q5QFB9 102 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 Q6ZRM9 215 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 Q6ZS92 163 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 PGPEP1LA6NFU8 196 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 SNRPD3P62318 126 aaKnown RBP16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 CTAG1AP78358 180 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 FAM159AQ6UWV7 190 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 PROK2Q9HC23 129 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 WISP1O95388 367 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 HIST1H2BLQ99880 126 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 RNF5Q99942 180 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 AGMATQ9BSE5 352 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 IGHV3OR16-13A0A075B7E8 117 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 IGHV3-74A0A0B4J1X5 117 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 CXCL1P09341 107 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 PYYP10082 97 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 ORMDL3Q8N138 153 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 LY6G6EA0A0G2JKS1 128 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 U3KQA8 63 aa16.12■□□□□ 0.17
TGFBR1-201ENST00000374990 A0A0G2JRQ6 117 aa16.11■□□□□ 0.17
TGFBR1-201ENST00000374990 METRNQ9UJH8 293 aa16.11■□□□□ 0.17
TGFBR1-201ENST00000374990 LINC00473A8K010 186 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms