RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TRAV10A0A0B4J240 114 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 KNCNA6PVL3 124 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 IGKV1-5P01602 117 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 ZNF688P0C7X2 276 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 RNASE2P10153 161 aaKnown RBP9.97□□□□□ -0.81
CXCL12-202ENST00000374426 SPP1P10451 314 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 CRYBB3P26998 211 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 PPP5CP53041 499 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 MORN3Q6PF18 240 aaPredicted RBP9.97□□□□□ -0.81
CXCL12-202ENST00000374426 CSNK1G2-AS1Q8NCQ2 148 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 DCANP1Q8TF63 244 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 GRAMD2BQ96HH9 432 aa9.97□□□□□ -0.81
CXCL12-202ENST00000374426 FNDC4Q9H6D8 234 aaPredicted RBP9.97□□□□□ -0.81
CXCL12-202ENST00000374426 A0A1W2PS18 150 aa9.96□□□□□ -0.82
CXCL12-202ENST00000374426 CLN5O75503 358 aa9.96□□□□□ -0.82
CXCL12-202ENST00000374426 ATP6V1G2O95670 118 aa9.96□□□□□ -0.82
CXCL12-202ENST00000374426 P2RY1P47900 373 aa9.96□□□□□ -0.82
CXCL12-202ENST00000374426 MLANAQ16655 118 aa9.96□□□□□ -0.82
CXCL12-202ENST00000374426 LINC00336Q6ZUF6 198 aa9.96□□□□□ -0.82
CXCL12-202ENST00000374426 SLC35G3Q8N808 338 aa9.96□□□□□ -0.82
CXCL12-202ENST00000374426 METTL26Q96S19 204 aa9.96□□□□□ -0.82
CXCL12-202ENST00000374426 SCPEP1Q9HB40 452 aa9.96□□□□□ -0.82
CXCL12-202ENST00000374426 CLEC5AQ9NY25 188 aa9.96□□□□□ -0.82
CXCL12-202ENST00000374426 A0A1B0GVY2 172 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 M0QYG6 137 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 CORTO00230 105 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 IFNA17P01571 189 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 IGKV1-17P01599 117 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 PI3P19957 117 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 RCVRNP35243 200 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 ETV6P41212 452 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 RND3P61587 244 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 LSM3P62310 102 aaKnown RBP9.95□□□□□ -0.82
CXCL12-202ENST00000374426 KCTD21Q4G0X4 260 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 ACTL10Q5JWF8 245 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 SNX29P2Q8IUI4 249 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 OR4X1Q8NH49 305 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 TP53RKQ96S44 253 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 RNF126Q9BV68 326 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 TBC1D24Q9ULP9 559 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 CELA1Q9UNI1 258 aa9.95□□□□□ -0.82
CXCL12-202ENST00000374426 OPRK1P41145 380 aa9.94□□□□□ -0.82
CXCL12-202ENST00000374426 AKR1C2P52895 323 aa9.94□□□□□ -0.82
CXCL12-202ENST00000374426 SUB1P53999 127 aaKnown RBP eCLIP9.94□□□□□ -0.82
CXCL12-202ENST00000374426 YIPF6Q96EC8 236 aa9.94□□□□□ -0.82
CXCL12-202ENST00000374426 COMMD3Q9UBI1 195 aa9.94□□□□□ -0.82
CXCL12-202ENST00000374426 A0A0G2JRQ6 117 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 SMIM31A0A1B0GVY4 71 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 APOA1P02647 267 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 AMBPP02760 352 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 PGAM2P15259 253 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 RPL5P46777 297 aaKnown RBP9.93□□□□□ -0.82
CXCL12-202ENST00000374426 HOXA1P49639 335 aaPredicted RBP9.93□□□□□ -0.82
CXCL12-202ENST00000374426 PIGPP57054 158 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 C12orf74Q32Q52 190 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 BSXQ3C1V8 233 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 TIGITQ495A1 244 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 ZNF767PQ75MW2 155 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 LHFPL1Q86WI0 220 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 CENPSQ8N2Z9 138 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 TMEM230Q96A57 120 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 ZNF486Q96H40 463 aaPredicted RBP9.93□□□□□ -0.82
CXCL12-202ENST00000374426 RAB40CQ96S21 281 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 U3KQE9 123 aa9.93□□□□□ -0.82
CXCL12-202ENST00000374426 DEFB131BA0A096LNP1 70 aa9.92□□□□□ -0.82
CXCL12-202ENST00000374426 DHRS2Q13268 280 aa9.92□□□□□ -0.82
CXCL12-202ENST00000374426 PSMG4Q5JS54 123 aa9.92□□□□□ -0.82
CXCL12-202ENST00000374426 GLMPQ8WWB7 406 aa9.92□□□□□ -0.82
CXCL12-202ENST00000374426 NARS2Q96I59 477 aaKnown RBP9.92□□□□□ -0.82
CXCL12-202ENST00000374426 PDCD10Q9BUL8 212 aa9.92□□□□□ -0.82
CXCL12-202ENST00000374426 SCRT1Q9BWW7 348 aa9.92□□□□□ -0.82
CXCL12-202ENST00000374426 MUC4Q99102 2169 aa9.91□□□□□ -0.82
CXCL12-202ENST00000374426 C3orf85A0A1B0GTC6 90 aa9.91□□□□□ -0.82
CXCL12-202ENST00000374426 SCGB2A1O75556 95 aa9.91□□□□□ -0.82
CXCL12-202ENST00000374426 ELK1P19419 428 aa9.91□□□□□ -0.82
CXCL12-202ENST00000374426 SP6Q3SY56 376 aa9.91□□□□□ -0.82
CXCL12-202ENST00000374426 C16orf54Q6UWD8 224 aa9.91□□□□□ -0.82
CXCL12-202ENST00000374426 Q6ZRM9 215 aa9.91□□□□□ -0.82
CXCL12-202ENST00000374426 POM121L12Q8N7R1 296 aa9.91□□□□□ -0.82
CXCL12-202ENST00000374426 ENY2Q9NPA8 101 aa9.91□□□□□ -0.82
CXCL12-202ENST00000374426 KLK11Q9UBX7 282 aa9.91□□□□□ -0.82
CXCL12-202ENST00000374426 TRAV30A0A087WSZ9 112 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 HELTA6NFD8 242 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 RTL8CO15255 209 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 HPGDSO60760 199 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 ATG12O94817 140 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 IGLC1P0CG04 106 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 P0DMU3 169 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 FAM231AP0DMU4 169 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 FAM231CP0DMU5 169 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 MED14OSP0DP75 135 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 EIF2B2P49770 351 aaKnown RBP9.9□□□□□ -0.82
CXCL12-202ENST00000374426 TRIM16LQ309B1 348 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 AARDQ4LEZ3 155 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 RNASE12Q5GAN4 147 aaKnown RBP9.9□□□□□ -0.82
CXCL12-202ENST00000374426 RNASE10Q5GAN6 216 aaKnown RBP9.9□□□□□ -0.82
CXCL12-202ENST00000374426 ARRDC1Q8N5I2 433 aa9.9□□□□□ -0.82
CXCL12-202ENST00000374426 PRSS29PA6NIE9 313 aa9.89□□□□□ -0.83
CXCL12-202ENST00000374426 FAM90A26D6RGX4 464 aa9.89□□□□□ -0.83
CXCL12-202ENST00000374426 CD3DP04234 171 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms