RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZNF837Q96EG3 531 aaPredicted RBP11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 MESP1Q9BRJ9 268 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 TRAV9-1A0A075B6T8 112 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 TRAV8-6A0A0B4J262 113 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 ANOS1P23352 680 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 BTCP35070 178 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 DRAM1Q8N682 238 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 C16orf92Q96LL3 132 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 PPP1R17O96001 155 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 NAPSAO96009 420 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 RTBDNQ9BSG5 229 aaPredicted RBP11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 A0A0G2JLM5 398 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 KNCNA6PVL3 124 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 TIMP3P35625 211 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 ADAMTSL5Q6ZMM2 481 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 SEC16AO15027 2179 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 FAM201AQ5SY85 155 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 BIVMQ86UB2 503 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 NPCDR1Q9BY65 106 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 SIP14410 1827 aa11.18□□□□□ -0.62
RAPGEF1-201ENST00000372189 VWC2LB2RUY7 222 aa11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 SNAI2O43623 268 aa11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 C1orf195Q5TG92 126 aa11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 FAM53AQ6NSI3 398 aaPredicted RBP11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 CLDND2Q8NHS1 167 aa11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 RBMY1BA6NDE4 496 aaKnown RBP11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 RBMY1EA6NEQ0 496 aaKnown RBP11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 RBMY1DP0C7P1 496 aaKnown RBP11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 RBMY1A1P0DJD3 496 aaKnown RBP11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 RBMY1CP0DJD4 496 aa11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 NPIPB11E5RHQ5 1161 aa11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 PRDM13Q9H4Q3 707 aa11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 SDF2L1Q9HCN8 221 aa11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 FAM216BQ8N7L0 139 aa11.17□□□□□ -0.62
RAPGEF1-201ENST00000372189 A0A1B0GTI1 187 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 IL18BPO95998 194 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 THBDP07204 575 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 IL6RP08887 468 aaPredicted RBP11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 FAM90A1Q86YD7 464 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 GATAD1Q8WUU5 269 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 ZNF414Q96IQ9 312 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 MS4A6AQ9H2W1 248 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 Q0VFX4 171 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 DPM3Q9P2X0 92 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 NPIPB6E9PJ23 425 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 CX3CL1P78423 397 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 TMEM56-RWDD3S4R434 201 aa11.16□□□□□ -0.62
RAPGEF1-201ENST00000372189 NCR2O95944 276 aa11.15□□□□□ -0.62
RAPGEF1-201ENST00000372189 EGR1P18146 543 aa11.15□□□□□ -0.62
RAPGEF1-201ENST00000372189 CD300EQ496F6 205 aaPredicted RBP11.15□□□□□ -0.62
RAPGEF1-201ENST00000372189 SEMA5BQ9P283 1151 aa11.15□□□□□ -0.62
RAPGEF1-201ENST00000372189 SLC25A15Q9Y619 301 aa11.15□□□□□ -0.62
RAPGEF1-201ENST00000372189 SCN2AQ99250 2005 aa11.15□□□□□ -0.62
RAPGEF1-201ENST00000372189 A0A0U1RQV1 116 aa11.15□□□□□ -0.62
RAPGEF1-201ENST00000372189 UBE2CO00762 179 aa11.15□□□□□ -0.62
RAPGEF1-201ENST00000372189 ANK1P16157 1881 aa11.15□□□□□ -0.62
RAPGEF1-201ENST00000372189 IGHV1-18A0A0C4DH31 117 aa11.15□□□□□ -0.63
RAPGEF1-201ENST00000372189 A4D1N5 150 aa11.15□□□□□ -0.63
RAPGEF1-201ENST00000372189 GAGE12HA6NDE8 117 aa11.15□□□□□ -0.63
RAPGEF1-201ENST00000372189 PIKFYVEQ9Y2I7 2098 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 TDGF1P3P51864 188 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 BMPERQ8N8U9 685 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 SRSF8Q9BRL6 282 aaKnown RBP11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 GGTLC1Q9BX51 225 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 ZDBF2Q9HCK1 2354 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 FOXF2Q12947 444 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 BRWD1Q9NSI6 2320 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 REG1AP05451 166 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 F8VVB4 439 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 F8VWA3 439 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 PHLDA3Q9Y5J5 127 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 ARID1AO14497 2285 aa11.14□□□□□ -0.63
RAPGEF1-201ENST00000372189 ADMP35318 185 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 C1QL2Q7Z5L3 287 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 Q8NFD4 153 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 GGTLC3B5MD39 225 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 RRN3P1Q2M238 152 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 RNF126Q9BV68 326 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 IGFBP3P17936 291 aaPredicted RBP11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 DLX6P56179 175 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 GOLT1AQ6ZVE7 132 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 TMEM170AQ8WVE7 144 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 JMJD8Q96S16 334 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 CRYBA4P53673 196 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 DSCR9P59020 149 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 RPL39P5Q59GN2 51 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 TRBV7-9A0A0J9YWB2 115 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 FGF16O43320 207 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 IMMP2LQ96T52 175 aa11.13□□□□□ -0.63
RAPGEF1-201ENST00000372189 IGKV1D-33P01593 117 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 IGKV1-33P01594 117 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 RBMY1FQ15415 496 aaKnown RBP11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 MRPL23Q16540 153 aaKnown RBP11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 MBNL2Q5VZF2 373 aaKnown RBP11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 MDS2Q8NDY4 140 aa11.12□□□□□ -0.63
RAPGEF1-201ENST00000372189 TRAV9-2A0A087WT02 112 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms