RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 CXorf1O96002 111 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 RBP4P02753 201 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 HIST1H1BP16401 226 aaKnown RBP8.35□□□□□ -1.07
COL5A1-202ENST00000371820 CEBPDP49716 269 aaPredicted RBP8.35□□□□□ -1.07
COL5A1-202ENST00000371820 THBS3P49746 956 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 LGALS4P56470 323 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 EDDM3BP56851 147 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 RPL23P62829 140 aaKnown RBP8.35□□□□□ -1.07
COL5A1-202ENST00000371820 COL10A1Q03692 680 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 MEF2CQ06413 473 aaPredicted RBP8.35□□□□□ -1.07
COL5A1-202ENST00000371820 ZNF816Q0VGE8 651 aaPredicted RBP8.35□□□□□ -1.07
COL5A1-202ENST00000371820 KLRD1Q13241 179 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 ADIRFQ15847 76 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 MORN2Q502X0 79 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 TREML4Q6UXN2 200 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 TMEM183AQ8IXX5 376 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 HIST3H2BBQ8N257 126 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 BEND2Q8NDZ0 799 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 OR52L2PQ8NGH6 319 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 OR51G1Q8NGK1 321 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 OR4S2Q8NH73 311 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 UHRF2Q96PU4 802 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 OR4F4Q96R69 305 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 GPHA2Q96T91 129 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 HEYLQ9NQ87 328 aaPredicted RBP8.35□□□□□ -1.07
COL5A1-202ENST00000371820 C1RLQ9NZP8 487 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 VPREB3Q9UKI3 123 aa8.35□□□□□ -1.07
COL5A1-202ENST00000371820 A0A1W2PRD5 423 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 A0A1W2PRF3 423 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 A0A1W2PRM7 423 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 hADV38S2A0JD32 116 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 CLPSL1A2RUU4 121 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 C17orf98A8MV24 154 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 ST8SIA5O15466 376 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 GGCTO75223 188 aaKnown RBP8.34□□□□□ -1.07
COL5A1-202ENST00000371820 S1PR2O95136 353 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 IGHV4-59P01825 116 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 DUTP33316 252 aaKnown RBP8.34□□□□□ -1.07
COL5A1-202ENST00000371820 ELLP55199 621 aaPredicted RBP8.34□□□□□ -1.07
COL5A1-202ENST00000371820 PKIAP61925 76 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 RPL30P62888 115 aaKnown RBP8.34□□□□□ -1.07
COL5A1-202ENST00000371820 PRAMEF5Q5TYX0 476 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 TMEM200BQ69YZ2 307 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 TMEM18Q96B42 140 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 NOL4LQ96MY1 436 aaPredicted RBP8.34□□□□□ -1.07
COL5A1-202ENST00000371820 RNF2Q99496 336 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 PARLQ9H300 379 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 VSIRQ9H7M9 311 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 GNG12Q9UBI6 72 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 RFNGQ9Y644 331 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 URGCP-MRPS24S4R325 110 aa8.34□□□□□ -1.07
COL5A1-202ENST00000371820 C11orf94C9JXX5 98 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 C15orf65H3BRN8 121 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 YIF1AO95070 293 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 CCL3L1P16619 93 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 FGF8P55075 233 aaPredicted RBP8.33□□□□□ -1.08
COL5A1-202ENST00000371820 RHOBP62745 196 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 DEFA6Q01524 100 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 Q3ZCU0 254 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 ACSM6Q6P461 480 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 SSX9Q7RTT3 188 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 C16orf82Q7Z2V1 217 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 C5orf24Q7Z6I8 188 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 OR10D4PQ8NGN7 298 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 MRGPRDQ8TDS7 321 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 ABHD5Q8WTS1 349 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 TMEM170AQ8WVE7 144 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 FRZBQ92765 325 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 RPUSD4Q96CM3 377 aaKnown RBP8.33□□□□□ -1.08
COL5A1-202ENST00000371820 COQ2Q96H96 371 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 ZNF714Q96N38 554 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 PRNDQ9UKY0 176 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 PSG11Q9UQ72 335 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 TBL2Q9Y4P3 447 aaKnown RBP8.33□□□□□ -1.08
COL5A1-202ENST00000371820 LINC00312Q9Y6C7 94 aa8.33□□□□□ -1.08
COL5A1-202ENST00000371820 PAGE4O60829 102 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 RAMP3O60896 148 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 COX7A1P24310 79 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 RPL29P47914 159 aaKnown RBP8.32□□□□□ -1.08
COL5A1-202ENST00000371820 DLX1P56177 255 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 HSPE1P61604 102 aaKnown RBP8.32□□□□□ -1.08
COL5A1-202ENST00000371820 PRB3Q04118 309 aaPredicted RBP8.32□□□□□ -1.08
COL5A1-202ENST00000371820 EDDM3AQ14507 147 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 JOSD1Q15040 202 aaPredicted RBP8.32□□□□□ -1.08
COL5A1-202ENST00000371820 POU2AF1Q16633 256 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 IZUMO4Q1ZYL8 232 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 HCP5Q6MZN7 132 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 ZNF343Q6P1L6 599 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 PNKDQ8N490 385 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 OR1P1Q8NH06 330 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 WFDC12Q8WWY7 111 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 MEGF9Q9H1U4 602 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 ZNF257Q9Y2Q1 563 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 RNF114Q9Y508 228 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 CMYA5Q8N3K9 4069 aa8.32□□□□□ -1.08
COL5A1-202ENST00000371820 TRGV10A0A0A0MS01 117 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 TRAV39A0A0B4J263 110 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 C15orf62A8K5M9 175 aa8.31□□□□□ -1.08
COL5A1-202ENST00000371820 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms