RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 NPPCP23582 126 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 PPP1R27Q86WC6 154 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 OR11H6Q8NGC7 330 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 ACY3Q96HD9 319 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 C12orf57Q99622 126 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 DNAJC4Q9NNZ3 241 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 ONECUT1Q9UBC0 465 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 SIGLEC9Q9Y336 463 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 SPG11Q96JI7 2443 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 MDFIC2A0A1B0GVS7 189 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 A0A1W2PRE2 83 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 CGB1A6NKQ9 187 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 LY6LH3BQJ8 138 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 COX6B1P14854 86 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 CTAG1AP78358 180 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 PSG5Q15238 335 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 C1orf122Q6ZSJ8 110 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 MIR17HGQ75NE6 70 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 KIR3DL3Q8N743 410 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 OR1P1Q8NH06 330 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 PSMG3-AS1Q96PY0 264 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 SLC25A33Q9BSK2 321 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 SSBP3Q9BWW4 388 aaPredicted RBP11.26□□□□□ -0.61
USF1-202ENST00000368020 YTHDF2Q9Y5A9 579 aaKnown RBP11.26□□□□□ -0.61
USF1-202ENST00000368020 A0A1W2PPR1 153 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 IGLC7A0M8Q6 106 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 OR7C2O60412 319 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 GGCTO75223 188 aaKnown RBP11.26□□□□□ -0.61
USF1-202ENST00000368020 TRGC2P03986 189 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 HOXA5P20719 270 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 HTR1DP28221 377 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 TNXAQ16473 311 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 SPATA31B1PQ5VZV4 182 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 STXBP6Q8NFX7 210 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 OR2T10Q8NGZ9 312 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 HRNRQ86YZ3 2850 aaPredicted RBP11.26□□□□□ -0.61
USF1-202ENST00000368020 PTPN13Q12923 2485 aa11.26□□□□□ -0.61
USF1-202ENST00000368020 GCN1Q92616 2671 aaKnown RBP11.25□□□□□ -0.61
USF1-202ENST00000368020 TRAV9-1A0A075B6T8 112 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 LOC105371242A0A075B767 164 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 SCO2A0A1W2PP80 73 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 A1L4Q6 167 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 E7EUB6 86 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 COX7A2P2O60397 106 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 TYMSP04818 313 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 CRYGCP07315 174 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 COX7A1P24310 79 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 CDX1P47902 265 aaPredicted RBP11.25□□□□□ -0.61
USF1-202ENST00000368020 SFRP2Q96HF1 295 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 TRGV9Q99603 122 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 DPM3Q9P2X0 92 aa11.25□□□□□ -0.61
USF1-202ENST00000368020 PSMB11A5LHX3 300 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 OOSP1A8MZH6 123 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST1H2BKO60814 126 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST1H2BJP06899 126 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST1H2BOP23527 126 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST1H2BBP33778 126 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 GPR6P46095 362 aaPredicted RBP11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST1H2BDP58876 126 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST1H2BCP62807 126 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 S100A12P80511 92 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 FOXL1Q12952 345 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST2H2BEQ16778 126 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 MRGPRG-AS1Q2M3A8 158 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.24□□□□□ -0.61
USF1-202ENST00000368020 C10orf55Q5SWW7 151 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 TPTE2P1Q5T6R2 138 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 C10orf113Q5VZT2 155 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 CCDC144NLQ6NUI1 221 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 TMEM116Q8NCL8 245 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 OR1L6Q8NGR2 347 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 OR2T6Q8NHC8 308 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 TMEM190Q8WZ59 177 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST1H2BHQ93079 126 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST1H2BNQ99877 126 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 HIST1H2BMQ99879 126 aa11.24□□□□□ -0.61
USF1-202ENST00000368020 IGHV3-72A0A0B4J1Y9 119 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 SOD3P08294 240 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 PRTN3P24158 256 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 NPIPB3Q92617 1050 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 FNDC4Q9H6D8 234 aaPredicted RBP11.23□□□□□ -0.61
USF1-202ENST00000368020 TPSG1Q9NRR2 321 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 UTP20O75691 2785 aaKnown RBP11.23□□□□□ -0.61
USF1-202ENST00000368020 CENPEQ02224 2701 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 DCHS2Q6V1P9 2916 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 C22orf46C9J442 243 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 FOXH1O75593 365 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 S100A2P29034 98 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 NDUFA6P56556 154 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 RPL19P84098 196 aaKnown RBP11.23□□□□□ -0.61
USF1-202ENST00000368020 PLGLAQ15195 96 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 DERL1Q9BUN8 251 aa11.23□□□□□ -0.61
USF1-202ENST00000368020 F11RQ9Y624 299 aaKnown RBP11.23□□□□□ -0.61
USF1-202ENST00000368020 A0A1W2PPQ1 181 aa11.22□□□□□ -0.61
USF1-202ENST00000368020 FABP1P07148 127 aa11.22□□□□□ -0.61
USF1-202ENST00000368020 UBE2L3P68036 154 aaKnown RBP11.22□□□□□ -0.61
USF1-202ENST00000368020 MLANAQ16655 118 aa11.22□□□□□ -0.61
USF1-202ENST00000368020 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
USF1-202ENST00000368020 MISP3Q96FF7 219 aa11.22□□□□□ -0.61
USF1-202ENST00000368020 PERPQ96FX8 193 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms