RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 FAM222BQ8WU58 562 aa12□□□□□ -0.49
PRKN-204ENST00000366896 BMPR1BO00238 502 aa12□□□□□ -0.49
PRKN-204ENST00000366896 SPINK4O60575 86 aa12□□□□□ -0.49
PRKN-204ENST00000366896 FOXH1O75593 365 aa12□□□□□ -0.49
PRKN-204ENST00000366896 SRIP30626 198 aa12□□□□□ -0.49
PRKN-204ENST00000366896 GATA4P43694 442 aa12□□□□□ -0.49
PRKN-204ENST00000366896 GNG4P50150 75 aa12□□□□□ -0.49
PRKN-204ENST00000366896 C17orf58Q2M2W7 97 aa12□□□□□ -0.49
PRKN-204ENST00000366896 CENPWQ5EE01 88 aa12□□□□□ -0.49
PRKN-204ENST00000366896 MOGAT3Q86VF5 341 aa12□□□□□ -0.49
PRKN-204ENST00000366896 C22orf15Q8WYQ4 148 aa12□□□□□ -0.49
PRKN-204ENST00000366896 NEUROG1Q92886 237 aa12□□□□□ -0.49
PRKN-204ENST00000366896 LINC00574Q9H8X3 128 aa12□□□□□ -0.49
PRKN-204ENST00000366896 OSTCQ9NRP0 149 aa12□□□□□ -0.49
PRKN-204ENST00000366896 MRPS16Q9Y3D3 137 aaKnown RBP12□□□□□ -0.49
PRKN-204ENST00000366896 K7EP13 123 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 MYOD1P15172 320 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 TSPOP30536 169 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 UBE2V1Q13404 147 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 DUX4L9Q6RFH8 374 aaPredicted RBP11.99□□□□□ -0.49
PRKN-204ENST00000366896 STPG3Q8N7X2 389 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 OR2V2Q96R30 315 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 WNT10AQ9GZT5 417 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 ZNF257Q9Y2Q1 563 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 HEATR1Q9H583 2144 aaKnown RBP11.99□□□□□ -0.49
PRKN-204ENST00000366896 KBTBD11-OT1A0A1B0GTJ5 212 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 HELTA6NFD8 242 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 CA2P00918 260 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 HLA-DQA1P01909 254 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 AMY1AP04745 511 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 SAPCD1Q5SSQ6 148 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 TSKUQ8WUA8 353 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 COX11Q9Y6N1 276 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 KALRNO60229 2985 aa11.99□□□□□ -0.49
PRKN-204ENST00000366896 SMG1Q96Q15 3661 aaKnown RBP11.98□□□□□ -0.49
PRKN-204ENST00000366896 GLRXP35754 106 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 CT45A1Q5HYN5 189 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 OR4A47Q6IF82 309 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 PNKDQ8N490 385 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 OR4P4Q8NGL7 312 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 CT45A3Q8NHU0 189 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 RND1Q92730 232 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 RNASE7Q9H1E1 156 aaKnown RBP11.98□□□□□ -0.49
PRKN-204ENST00000366896 IGLV3-9A0A075B6K5 115 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 TRAV34A0A0B4J273 112 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 CCL21O00585 134 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 PRB1P04280 392 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 SAA2P0DJI9 122 aaPredicted RBP11.98□□□□□ -0.49
PRKN-204ENST00000366896 ZNF474Q6S9Z5 364 aaPredicted RBP11.98□□□□□ -0.49
PRKN-204ENST00000366896 PQLC2Q6ZP29 291 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 ZNF439Q8NDP4 499 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 ENY2Q9NPA8 101 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 PRNDQ9UKY0 176 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 NBASA2RRP1 2371 aa11.98□□□□□ -0.49
PRKN-204ENST00000366896 SPRY3O43610 288 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 SLC35B1P78383 322 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 TIMM23BQ5SRD1 257 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 VHLLQ6RSH7 139 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 UNQ5815/PRO19632Q6UWF5 114 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 FAM19A2Q8N3H0 131 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 ZNF738Q8NE65 137 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 BORCS7Q96B45 105 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 C19orf24Q9BVV8 132 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 TMEM167BQ9NRX6 74 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 SLC35D1Q9NTN3 355 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 IDI2-AS1Q9NZ38 188 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 CDC42EP3Q9UKI2 254 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 ZFYVE26Q68DK2 2539 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 IGHV2-26A0A0B4J1V2 119 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 ISLRO14498 428 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 CRYBB3P26998 211 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 CDKN1BP46527 198 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 HINT1P49773 126 aaPredicted RBP11.97□□□□□ -0.49
PRKN-204ENST00000366896 FXYD3Q14802 87 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 PMCHL1Q16048 86 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 OR5B3Q8NH48 314 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 BET1LQ9NYM9 111 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 MRPL27Q9P0M9 148 aaKnown RBP11.97□□□□□ -0.49
PRKN-204ENST00000366896 IL19Q9UHD0 177 aa11.97□□□□□ -0.49
PRKN-204ENST00000366896 SMIM27A0A1W2PRY6 76 aa11.96□□□□□ -0.49
PRKN-204ENST00000366896 M0R1B8 84 aa11.96□□□□□ -0.49
PRKN-204ENST00000366896 LINC00869P0C866 280 aa11.96□□□□□ -0.49
PRKN-204ENST00000366896 TCL1AP56279 114 aa11.96□□□□□ -0.49
PRKN-204ENST00000366896 STUMQ69YW2 141 aa11.96□□□□□ -0.49
PRKN-204ENST00000366896 Q6ZVH6 145 aa11.96□□□□□ -0.49
PRKN-204ENST00000366896 ITLN1Q8WWA0 313 aa11.96□□□□□ -0.49
PRKN-204ENST00000366896 COTL1Q14019 142 aa11.96□□□□□ -0.5
PRKN-204ENST00000366896 RTL8BQ17RB0 113 aa11.96□□□□□ -0.5
PRKN-204ENST00000366896 MAJINQ3KP22 176 aa11.96□□□□□ -0.5
PRKN-204ENST00000366896 TIGITQ495A1 244 aa11.96□□□□□ -0.5
PRKN-204ENST00000366896 CLEC7AQ9BXN2 247 aa11.96□□□□□ -0.5
PRKN-204ENST00000366896 JKAMPQ9P055 326 aa11.96□□□□□ -0.5
PRKN-204ENST00000366896 CADP27708 2225 aa11.95□□□□□ -0.5
PRKN-204ENST00000366896 LOC105371242A0A075B767 164 aa11.95□□□□□ -0.5
PRKN-204ENST00000366896 IGFBP2P18065 325 aa11.95□□□□□ -0.5
PRKN-204ENST00000366896 GNLYP22749 145 aa11.95□□□□□ -0.5
PRKN-204ENST00000366896 UQCRFS1P47985 274 aa11.95□□□□□ -0.5
PRKN-204ENST00000366896 SELENOVP59797 346 aa11.95□□□□□ -0.5
PRKN-204ENST00000366896 PRCDQ00LT1 54 aa11.95□□□□□ -0.5
PRKN-204ENST00000366896 MRPL54Q6P161 138 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms