RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 RUNX1Q01196 453 aa17.12■□□□□ 0.33
HOXA4-201ENST00000360046 TREML4Q6UXN2 200 aa17.12■□□□□ 0.33
HOXA4-201ENST00000360046 FBXL7Q9UJT9 491 aa17.12■□□□□ 0.33
HOXA4-201ENST00000360046 ANKRD34BA5PLL1 514 aa17.11■□□□□ 0.33
HOXA4-201ENST00000360046 FNDC10F2Z333 226 aa17.11■□□□□ 0.33
HOXA4-201ENST00000360046 TSPAN9O75954 239 aa17.11■□□□□ 0.33
HOXA4-201ENST00000360046 PPIFP30405 207 aaKnown RBP17.11■□□□□ 0.33
HOXA4-201ENST00000360046 TEX261Q6UWH6 196 aa17.11■□□□□ 0.33
HOXA4-201ENST00000360046 Q8N2B8 174 aa17.11■□□□□ 0.33
HOXA4-201ENST00000360046 GINS3Q9BRX5 216 aa17.11■□□□□ 0.33
HOXA4-201ENST00000360046 WDR83OSQ9Y284 106 aa17.11■□□□□ 0.33
HOXA4-201ENST00000360046 K7EIM0 57 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 RND2P52198 227 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 RHOGP84095 191 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 BTNL8Q6UX41 500 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 PARD6GQ9BYG4 376 aaPredicted RBP17.1■□□□□ 0.33
HOXA4-201ENST00000360046 SH3BGRL3Q9H299 93 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 ARV1Q9H2C2 271 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 MRPL36Q9P0J6 103 aaKnown RBP17.1■□□□□ 0.33
HOXA4-201ENST00000360046 NDUFB8O95169 186 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 IFNA7P01567 189 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 ATP6V0CP27449 155 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 RPL15P61313 204 aaKnown RBP17.1■□□□□ 0.33
HOXA4-201ENST00000360046 SRSF2Q01130 221 aaKnown RBP17.1■□□□□ 0.33
HOXA4-201ENST00000360046 ACSM6Q6P461 480 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 TEPPQ6URK8 271 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 ALKAL2Q6UX46 152 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 Q6ZSV7 163 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 ZNF329Q86UD4 541 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 S4R3C0 116 aa17.1■□□□□ 0.33
HOXA4-201ENST00000360046 CFHR3Q02985 330 aa17.09■□□□□ 0.33
HOXA4-201ENST00000360046 TMEM144Q7Z5S9 345 aa17.09■□□□□ 0.33
HOXA4-201ENST00000360046 SCARB1Q8WTV0 552 aa17.09■□□□□ 0.33
HOXA4-201ENST00000360046 TMED6Q8WW62 240 aa17.09■□□□□ 0.33
HOXA4-201ENST00000360046 NPIPB3Q92617 1050 aa17.09■□□□□ 0.33
HOXA4-201ENST00000360046 RSG1Q9BU20 258 aa17.09■□□□□ 0.33
HOXA4-201ENST00000360046 SLC25A32Q9H2D1 315 aa17.09■□□□□ 0.33
HOXA4-201ENST00000360046 TRBV9A0A0B4J1U6 114 aa17.08■□□□□ 0.32
HOXA4-201ENST00000360046 TRGV3P03979 118 aa17.08■□□□□ 0.32
HOXA4-201ENST00000360046 PF4V1P10720 104 aa17.08■□□□□ 0.32
HOXA4-201ENST00000360046 C15orf32Q32M92 178 aa17.08■□□□□ 0.32
HOXA4-201ENST00000360046 NECAP1Q8NC96 275 aa17.08■□□□□ 0.32
HOXA4-201ENST00000360046 ZNF680Q8NEM1 530 aa17.08■□□□□ 0.32
HOXA4-201ENST00000360046 GNPNAT1Q96EK6 184 aaPredicted RBP17.08■□□□□ 0.32
HOXA4-201ENST00000360046 MFSD2BA6NFX1 497 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 H3BUA1 57 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 MPDU1O75352 247 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 MDKP21741 143 aaPredicted RBP17.07■□□□□ 0.32
HOXA4-201ENST00000360046 TPPP2P59282 170 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 EIF5AL1Q6IS14 154 aaKnown RBP17.07■□□□□ 0.32
HOXA4-201ENST00000360046 ZNF709Q8N972 641 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 PHYHIPLQ96FC7 376 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 NPCDR1Q9BY65 106 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 RFNGQ9Y644 331 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 IGLV1-40P01703 118 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 SLC35B1P78383 322 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 KLK9Q2XQG4 91 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 TMEM116Q8NCL8 245 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 MGST2Q99735 147 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 SERTAD4Q9NUC0 356 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 KLK9Q9UKQ9 250 aa17.07■□□□□ 0.32
HOXA4-201ENST00000360046 LSM4Q9Y4Z0 139 aaKnown RBP17.07■□□□□ 0.32
HOXA4-201ENST00000360046 PSMB11A5LHX3 300 aa17.06■□□□□ 0.32
HOXA4-201ENST00000360046 IGHV3-23P01764 117 aa17.06■□□□□ 0.32
HOXA4-201ENST00000360046 SPP1P10451 314 aa17.06■□□□□ 0.32
HOXA4-201ENST00000360046 CAMLGP49069 296 aa17.06■□□□□ 0.32
HOXA4-201ENST00000360046 RAB31Q13636 194 aa17.06■□□□□ 0.32
HOXA4-201ENST00000360046 C21orf62Q9NYP8 219 aa17.06■□□□□ 0.32
HOXA4-201ENST00000360046 IGKV1OR2-108A0A075B7D4 117 aa17.05■□□□□ 0.32
HOXA4-201ENST00000360046 ZFP92A6NM28 416 aa17.05■□□□□ 0.32
HOXA4-201ENST00000360046 C17orf112F2Z3M2 114 aa17.05■□□□□ 0.32
HOXA4-201ENST00000360046 C10orf99Q6UWK7 81 aa17.05■□□□□ 0.32
HOXA4-201ENST00000360046 CENPVQ7Z7K6 275 aaPredicted RBP17.05■□□□□ 0.32
HOXA4-201ENST00000360046 OR2G3Q8NGZ4 309 aa17.05■□□□□ 0.32
HOXA4-201ENST00000360046 OR4X1Q8NH49 305 aa17.05■□□□□ 0.32
HOXA4-201ENST00000360046 SETD2Q9BYW2 2564 aaPredicted RBP17.05■□□□□ 0.32
HOXA4-201ENST00000360046 FAM223BA6NKX1 122 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 AGPAT2O15120 278 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 IGHG4P01861 327 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 SEC11BP0C7V7 166 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 MFAP4P55083 255 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 FAM74A1Q5RGS3 127 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 LCNL1Q6ZST4 164 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 FAM223AQ8IWN6 122 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 VN1R17PQ8TDU5 208 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 CXorf58Q96LI9 332 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 KLK15Q9H2R5 256 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 UBQLN2Q9UHD9 624 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 LINC00862A6NCI5 91 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 BRI3O95415 125 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 OR10J1P30954 320 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 NPBWR1P48145 328 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 ATP5G2Q06055 141 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 Q56UQ5 140 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 PSMG3Q9BT73 122 aaPredicted RBP17.04■□□□□ 0.32
HOXA4-201ENST00000360046 GGTLC1Q9BX51 225 aa17.04■□□□□ 0.32
HOXA4-201ENST00000360046 TEX38Q6PEX7 206 aa17.03■□□□□ 0.32
HOXA4-201ENST00000360046 TMEM182Q6ZP80 229 aaPredicted RBP17.03■□□□□ 0.32
HOXA4-201ENST00000360046 THAP8Q8NA92 274 aa17.03■□□□□ 0.32
HOXA4-201ENST00000360046 TIMM9Q9Y5J7 89 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms