RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 RBM14Q96PK6 669 aaKnown RBP18.08■□□□□ 0.48
SCAMP3-202ENST00000355379 IGKV1D-37A0A075B6S9 117 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 MT-CO2P00403 227 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 BCL2P10415 239 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 RND2P52198 227 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 DEFA5Q01523 94 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 ASPHD1Q5U4P2 390 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 C19orf35Q6ZS72 473 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 SVBPQ8N300 66 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 PIFOQ8TCI5 191 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 FAM103A1Q9BTL3 118 aaKnown RBP18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 MRPL36Q9P0J6 103 aaKnown RBP18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 CR1P17927 2039 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 CHD6Q8TD26 2715 aa18.07■□□□□ 0.48
SCAMP3-202ENST00000355379 I3L2K1 104 aa18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 NDUFS6O75380 124 aaKnown RBP18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 AVPP01185 164 aa18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 SRP19P09132 144 aaKnown RBP18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 FBP1P09467 338 aa18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 DEFA4P12838 97 aa18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 NDPQ00604 133 aa18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 SLC35E3Q7Z769 313 aa18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 KRTAP1-3Q8IUG1 177 aa18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 TRGV9Q99603 122 aa18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 MANBALQ9NQG1 85 aa18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 VAX2Q9UIW0 290 aa18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 ANKRD17O75179 2603 aaKnown RBP18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 USP9YO00507 2555 aaPredicted RBP18.06■□□□□ 0.48
SCAMP3-202ENST00000355379 HMGB3O15347 200 aaKnown RBP18.05■□□□□ 0.48
SCAMP3-202ENST00000355379 STAG3L2P0CL84 134 aa18.05■□□□□ 0.48
SCAMP3-202ENST00000355379 STAG3L3P0CL85 134 aa18.05■□□□□ 0.48
SCAMP3-202ENST00000355379 IGHV4-31P0DP07 118 aa18.05■□□□□ 0.48
SCAMP3-202ENST00000355379 EGR2P11161 476 aaPredicted RBP18.05■□□□□ 0.48
SCAMP3-202ENST00000355379 PSMB3P49720 205 aa18.05■□□□□ 0.48
SCAMP3-202ENST00000355379 RXFP4Q8TDU9 374 aa18.05■□□□□ 0.48
SCAMP3-202ENST00000355379 MOB4Q9Y3A3 225 aa18.05■□□□□ 0.48
SCAMP3-202ENST00000355379 ZFP92A6NM28 416 aa18.04■□□□□ 0.48
SCAMP3-202ENST00000355379 EIF3GO75821 320 aaKnown RBP eCLIP18.04■□□□□ 0.48
SCAMP3-202ENST00000355379 TGFAP01135 160 aa18.04■□□□□ 0.48
SCAMP3-202ENST00000355379 C5orf56Q8N8D9 126 aa18.04■□□□□ 0.48
SCAMP3-202ENST00000355379 RNF2Q99496 336 aa18.04■□□□□ 0.48
SCAMP3-202ENST00000355379 SSX3Q99909 188 aa18.04■□□□□ 0.48
SCAMP3-202ENST00000355379 CRYBG3Q68DQ2 2970 aa18.04■□□□□ 0.48
SCAMP3-202ENST00000355379 CXorf1O96002 111 aa18.03■□□□□ 0.48
SCAMP3-202ENST00000355379 SGMS2Q8NHU3 365 aa18.03■□□□□ 0.48
SCAMP3-202ENST00000355379 Q96MF0 132 aa18.03■□□□□ 0.48
SCAMP3-202ENST00000355379 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.03■□□□□ 0.482e-6■■■□□ 15.4
SCAMP3-202ENST00000355379 IGHV3-48P01763 117 aa18.03■□□□□ 0.48
SCAMP3-202ENST00000355379 GUCA2BQ16661 112 aa18.03■□□□□ 0.48
SCAMP3-202ENST00000355379 OR4X1Q8NH49 305 aa18.03■□□□□ 0.48
SCAMP3-202ENST00000355379 TMEM68Q96MH6 324 aa18.03■□□□□ 0.48
SCAMP3-202ENST00000355379 TMPRSS5Q9H3S3 457 aa18.03■□□□□ 0.48
SCAMP3-202ENST00000355379 TNFRSF19Q9NS68 423 aa18.03■□□□□ 0.48
SCAMP3-202ENST00000355379 FUT9Q9Y231 359 aa18.03■□□□□ 0.48
SCAMP3-202ENST00000355379 IGLV11-55A0A075B6I3 123 aa18.02■□□□□ 0.47
SCAMP3-202ENST00000355379 K7EIM0 57 aa18.02■□□□□ 0.47
SCAMP3-202ENST00000355379 SCO1O75880 301 aa18.02■□□□□ 0.47
SCAMP3-202ENST00000355379 SNAPINO95295 136 aa18.02■□□□□ 0.47
SCAMP3-202ENST00000355379 OR5G3P0C626 314 aa18.02■□□□□ 0.47
SCAMP3-202ENST00000355379 GATA2P23769 480 aaPredicted RBP18.02■□□□□ 0.47
SCAMP3-202ENST00000355379 NANPQ8TBE9 248 aa18.02■□□□□ 0.47
SCAMP3-202ENST00000355379 GATAD1Q8WUU5 269 aa18.02■□□□□ 0.47
SCAMP3-202ENST00000355379 HSPB9Q9BQS6 159 aa18.02■□□□□ 0.47
SCAMP3-202ENST00000355379 PSMB11A5LHX3 300 aa18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 KLK9Q2XQG4 91 aa18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 FAM78BQ5VT40 261 aa18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 HIST2H2BCQ6DN03 193 aa18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 MAPK1IP1LQ8NDC0 245 aa18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 OR1L4Q8NGR5 311 aa18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 FANCD2OSQ96PS1 177 aa18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 PFDN5Q99471 154 aa18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 MRPL32Q9BYC8 188 aaKnown RBP18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 SEPSECSQ9HD40 501 aaKnown RBP18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 KLK9Q9UKQ9 250 aa18.01■□□□□ 0.47
SCAMP3-202ENST00000355379 A6NDX4 124 aa18■□□□□ 0.47
SCAMP3-202ENST00000355379 ZNF90Q03938 601 aa18■□□□□ 0.47
SCAMP3-202ENST00000355379 SOHLH1Q5JUK2 328 aa18■□□□□ 0.47
SCAMP3-202ENST00000355379 ATRAIDQ6UW56 229 aa18■□□□□ 0.47
SCAMP3-202ENST00000355379 NKX6-2Q9C056 277 aaPredicted RBP18■□□□□ 0.47
SCAMP3-202ENST00000355379 DOPEY2Q9Y3R5 2298 aa17.99■□□□□ 0.47
SCAMP3-202ENST00000355379 ARL14EPLP0DKL9 152 aa17.99■□□□□ 0.47
SCAMP3-202ENST00000355379 SPATA31B1PQ5VZV4 182 aa17.99■□□□□ 0.47
SCAMP3-202ENST00000355379 SPNS3Q6ZMD2 512 aa17.99■□□□□ 0.47
SCAMP3-202ENST00000355379 FAM110DQ8TAY7 271 aaPredicted RBP17.99■□□□□ 0.47
SCAMP3-202ENST00000355379 DNAJC4Q9NNZ3 241 aa17.99■□□□□ 0.47
SCAMP3-202ENST00000355379 THYN1Q9P016 225 aa17.99■□□□□ 0.47
SCAMP3-202ENST00000355379 IGHV3-21A0A0B4J1V1 117 aa17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 FSHBP01225 129 aa17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 HIST1H1BP16401 226 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 MEF2BQ02080 365 aaPredicted RBP17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 C16orf82Q7Z2V1 217 aa17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 IQCF2Q8IXL9 164 aa17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 ZNF48Q96MX3 618 aaPredicted RBP17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 TECRQ9NZ01 308 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 PITPNC1Q9UKF7 332 aa17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 SOX21Q9Y651 276 aaPredicted RBP17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 ASH1LQ9NR48 2969 aaKnown RBP17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 CLN5O75503 358 aa17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 IGLC1P0CG04 106 aa17.98■□□□□ 0.47
SCAMP3-202ENST00000355379 TAS2R45P59539 299 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms