RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 RAB7AP51149 207 aa17.28■□□□□ 0.36
PTPN18-202ENST00000347849 KIAA1644Q3SXP7 199 aa17.28■□□□□ 0.36
PTPN18-202ENST00000347849 GNB4Q9HAV0 340 aa17.28■□□□□ 0.36
PTPN18-202ENST00000347849 FBXL7Q9UJT9 491 aa17.28■□□□□ 0.36
PTPN18-202ENST00000347849 C9JCJ5 164 aa17.28■□□□□ 0.36
PTPN18-202ENST00000347849 ITGB1BP1O14713 200 aa17.28■□□□□ 0.36
PTPN18-202ENST00000347849 SLC35B1P78383 322 aa17.28■□□□□ 0.36
PTPN18-202ENST00000347849 NAT8BQ9UHF3 227 aa17.28■□□□□ 0.36
PTPN18-202ENST00000347849 IGHV1-69-2A0A0G2JMI3 117 aa17.27■□□□□ 0.36
PTPN18-202ENST00000347849 B9A039 149 aa17.27■□□□□ 0.36
PTPN18-202ENST00000347849 GPX1P07203 203 aa17.27■□□□□ 0.36
PTPN18-202ENST00000347849 C11orf52Q96A22 123 aa17.27■□□□□ 0.36
PTPN18-202ENST00000347849 LPAR2Q9HBW0 351 aa17.27■□□□□ 0.36
PTPN18-202ENST00000347849 HELTA6NFD8 242 aa17.27■□□□□ 0.35
PTPN18-202ENST00000347849 CRYBB3P26998 211 aa17.27■□□□□ 0.35
PTPN18-202ENST00000347849 SLC25A48Q6ZT89 311 aaKnown RBP17.27■□□□□ 0.35
PTPN18-202ENST00000347849 MIR17HGQ75NE6 70 aa17.27■□□□□ 0.35
PTPN18-202ENST00000347849 MRPL52Q86TS9 123 aaKnown RBP17.27■□□□□ 0.35
PTPN18-202ENST00000347849 MUC15Q8N387 334 aa17.27■□□□□ 0.35
PTPN18-202ENST00000347849 IGFBP2P18065 325 aa17.26■□□□□ 0.35
PTPN18-202ENST00000347849 LOXP28300 417 aaPredicted RBP17.26■□□□□ 0.35
PTPN18-202ENST00000347849 GNG4P50150 75 aa17.26■□□□□ 0.35
PTPN18-202ENST00000347849 PQLC2Q6ZP29 291 aa17.26■□□□□ 0.35
PTPN18-202ENST00000347849 GNB1LQ9BYB4 327 aa17.26■□□□□ 0.35
PTPN18-202ENST00000347849 RNASE7Q9H1E1 156 aaKnown RBP17.26■□□□□ 0.35
PTPN18-202ENST00000347849 PRORYQ9H606 182 aa17.26■□□□□ 0.35
PTPN18-202ENST00000347849 RALYQ9UKM9 306 aaKnown RBP17.26■□□□□ 0.35
PTPN18-202ENST00000347849 MYOD1P15172 320 aa17.26■□□□□ 0.35
PTPN18-202ENST00000347849 RAB31Q13636 194 aa17.26■□□□□ 0.35
PTPN18-202ENST00000347849 PSG5Q15238 335 aa17.26■□□□□ 0.35
PTPN18-202ENST00000347849 CENPWQ5EE01 88 aa17.26■□□□□ 0.35
PTPN18-202ENST00000347849 CT45A6P0DMU7 189 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 CT45A5P0DMU8 189 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 CT45A7P0DMV0 189 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 NPY1RP25929 384 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 FXYD3Q14802 87 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 ZNF714Q96N38 554 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 HINT2Q9BX68 163 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 LY96Q9Y6Y9 160 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 DIRC3C9JPN6 131 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 LY6HO94772 140 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 IGKV1-16P04430 117 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 TFPI2P48307 235 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 SLC24A4Q8NFF2 622 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 FAM216AQ8WUB2 273 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 RAB9BQ9NP90 201 aa17.25■□□□□ 0.35
PTPN18-202ENST00000347849 TBL2Q9Y4P3 447 aaKnown RBP17.25■□□□□ 0.35
PTPN18-202ENST00000347849 NDUFB3O43676 98 aa17.24■□□□□ 0.35
PTPN18-202ENST00000347849 CA2P00918 260 aa17.24■□□□□ 0.35
PTPN18-202ENST00000347849 DLX1P56177 255 aa17.24■□□□□ 0.35
PTPN18-202ENST00000347849 TCL1AP56279 114 aa17.24■□□□□ 0.35
PTPN18-202ENST00000347849 FAM122AQ96E09 287 aa17.24■□□□□ 0.35
PTPN18-202ENST00000347849 MEF2CQ06413 473 aaPredicted RBP17.24■□□□□ 0.35
PTPN18-202ENST00000347849 GAGE1Q13065 139 aa17.24■□□□□ 0.35
PTPN18-202ENST00000347849 DIAPH2-AS1Q14236 149 aa17.24■□□□□ 0.35
PTPN18-202ENST00000347849 ZNF672Q499Z4 452 aaPredicted RBP17.24■□□□□ 0.35
PTPN18-202ENST00000347849 PKD1L2Q7Z442 2459 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 PRB3Q04118 309 aaPredicted RBP17.23■□□□□ 0.35
PTPN18-202ENST00000347849 OR4S2Q8NH73 311 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 NRN1Q9NPD7 142 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 ZNF586Q9NXT0 402 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 HIVEP3Q5T1R4 2406 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 TRBV9A0A0B4J1U6 114 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 SFTPCP11686 197 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 REG1BP48304 166 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 AMTP48728 403 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 CX3CL1P78423 397 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 LRRC10Q5BKY1 277 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 OR4A47Q6IF82 309 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 Q8N976 141 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.23■□□□□ 0.35
PTPN18-202ENST00000347849 RCHY1Q96PM5 261 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 GAL3ST2Q9H3Q3 398 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 ENY2Q9NPA8 101 aa17.23■□□□□ 0.35
PTPN18-202ENST00000347849 SPTBN1Q01082 2364 aaKnown RBP17.23■□□□□ 0.35
PTPN18-202ENST00000347849 C15orf61A6NNL5 157 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 SRRM4A7MD48 611 aaKnown RBP17.22■□□□□ 0.35
PTPN18-202ENST00000347849 LINC00869P0C866 280 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 AREGP15514 252 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 PMCHP20382 165 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 PRR20EP86478 221 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 PRR20CP86479 221 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 PRR20DP86480 221 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 PRR20BP86481 221 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 PRR20AP86496 221 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 CACNA1AO00555 2505 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 ZNF253O75346 499 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 RNF2Q99496 336 aa17.22■□□□□ 0.35
PTPN18-202ENST00000347849 A0A1W2PS18 150 aa17.21■□□□□ 0.35
PTPN18-202ENST00000347849 GATA2P23769 480 aaPredicted RBP17.21■□□□□ 0.35
PTPN18-202ENST00000347849 HSPE1P61604 102 aaKnown RBP17.21■□□□□ 0.35
PTPN18-202ENST00000347849 MMDQ15546 238 aa17.21■□□□□ 0.35
PTPN18-202ENST00000347849 TMEM136Q6ZRR5 245 aa17.21■□□□□ 0.35
PTPN18-202ENST00000347849 SUMO1P63165 101 aaKnown RBP17.21■□□□□ 0.34
PTPN18-202ENST00000347849 MOB3BQ86TA1 216 aa17.21■□□□□ 0.34
PTPN18-202ENST00000347849 OR4B1Q8NGF8 309 aa17.21■□□□□ 0.34
PTPN18-202ENST00000347849 NABP2Q9BQ15 211 aa17.21■□□□□ 0.34
PTPN18-202ENST00000347849 PPP1R14DQ9NXH3 145 aa17.21■□□□□ 0.34
PTPN18-202ENST00000347849 KIR2DS2P43631 304 aa17.2■□□□□ 0.34
PTPN18-202ENST00000347849 SPATA45Q537H7 98 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms