RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 SLC25A2Q9BXI2 301 aa12.77□□□□□ -0.36
LRP8-202ENST00000347547 TET2Q6N021 2002 aaPredicted RBP12.77□□□□□ -0.37
LRP8-202ENST00000347547 PSMB11A5LHX3 300 aa12.77□□□□□ -0.37
LRP8-202ENST00000347547 NDUFS8O00217 210 aa12.77□□□□□ -0.37
LRP8-202ENST00000347547 CEACAM3P40198 252 aa12.77□□□□□ -0.37
LRP8-202ENST00000347547 UBE2L3P68036 154 aaKnown RBP12.77□□□□□ -0.37
LRP8-202ENST00000347547 MRPL49Q13405 166 aaKnown RBP12.77□□□□□ -0.37
LRP8-202ENST00000347547 RPL39P5Q59GN2 51 aa12.77□□□□□ -0.37
LRP8-202ENST00000347547 CT83Q5H943 113 aa12.77□□□□□ -0.37
LRP8-202ENST00000347547 ZNF329Q86UD4 541 aa12.77□□□□□ -0.37
LRP8-202ENST00000347547 TPRX1Q8N7U7 411 aa12.77□□□□□ -0.37
LRP8-202ENST00000347547 IFI27L2Q9H2X8 130 aa12.77□□□□□ -0.37
LRP8-202ENST00000347547 HSPB8Q9UJY1 196 aa12.77□□□□□ -0.37
LRP8-202ENST00000347547 COL27A1Q8IZC6 1860 aaPredicted RBP12.77□□□□□ -0.37
LRP8-202ENST00000347547 IGHV3-64DA0A0J9YX35 117 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 CYB561P49447 251 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 POU2AF1Q16633 256 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 CR1LQ2VPA4 569 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 FAM234AQ9H0X4 552 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 GNG12Q9UBI6 72 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 LOXL2Q9Y4K0 774 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 FREM1Q5H8C1 2179 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 LOC102724200A0A096LPH7 203 aaPredicted RBP12.76□□□□□ -0.37
LRP8-202ENST00000347547 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.76□□□□□ -0.37
LRP8-202ENST00000347547 FAM231BA6NCW3 169 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 C9orf118A6NHY6 69 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 H3BRM9 83 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 TMEM97Q5BJF2 176 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 ZNF841Q6ZN19 808 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 ZNF826PQ6ZT77 177 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 NEGR1Q7Z3B1 354 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 DPF1Q92782 380 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 NDFIP1Q9BT67 221 aa12.76□□□□□ -0.37
LRP8-202ENST00000347547 FREM2Q5SZK8 3169 aa12.75□□□□□ -0.37
LRP8-202ENST00000347547 CCL4P13236 92 aa12.75□□□□□ -0.37
LRP8-202ENST00000347547 BPIFA4PQ86YQ2 179 aa12.75□□□□□ -0.37
LRP8-202ENST00000347547 ZNF714Q96N38 554 aa12.75□□□□□ -0.37
LRP8-202ENST00000347547 ZNF257Q9Y2Q1 563 aa12.75□□□□□ -0.37
LRP8-202ENST00000347547 HCFC1P51610 2035 aa12.75□□□□□ -0.37
LRP8-202ENST00000347547 HTR1DP28221 377 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 C2orf83Q53S99 150 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 ASPHD1Q5U4P2 390 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 DCTN5Q9BTE1 182 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 CXXC4Q9H2H0 198 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 PRNDQ9UKY0 176 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 PATE3B3GLJ2 98 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 C9orf172C9J069 976 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 K7EP34 96 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 F2RL2O00254 374 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 RBPJQ06330 500 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 WDR82Q6UXN9 313 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 PPP1R32Q7Z5V6 425 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 PLPPR2Q96GM1 343 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 OR51B2Q9Y5P1 312 aa12.74□□□□□ -0.37
LRP8-202ENST00000347547 TFF1P04155 84 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 LOXL3P58215 753 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 PRCDQ00LT1 54 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 LTC4SQ16873 150 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.73□□□□□ -0.37
LRP8-202ENST00000347547 FAM173AQ9BQD7 235 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 PRSS22Q9GZN4 317 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 RPP21Q9H633 154 aaKnown RBP12.73□□□□□ -0.37
LRP8-202ENST00000347547 A8MWL6 223 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 FOXA3P55318 350 aaPredicted RBP12.73□□□□□ -0.37
LRP8-202ENST00000347547 MOB3BQ86TA1 216 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 TMEM251Q8N6I4 163 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 C5orf17Q8NAS9 161 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 LRRC29Q8WV35 223 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 GFRA4Q9GZZ7 299 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 OBP2BQ9NPH6 170 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 B4GALT7Q9UBV7 327 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 KLF12Q9Y4X4 402 aa12.73□□□□□ -0.37
LRP8-202ENST00000347547 A6NDN8 102 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 M0R296 226 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 CELA3AP09093 270 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 SMIM17P0DL12 118 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 MYCNOSP40205 109 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 ZNF134P52741 427 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 MORN5Q5VZ52 161 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 OR9G1Q8NH87 305 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 TNFRSF14Q92956 283 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 CXorf67Q86X51 503 aaPredicted RBP12.72□□□□□ -0.37
LRP8-202ENST00000347547 CD177Q8N6Q3 437 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 OR1L8Q8NGR8 309 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 ZNF492Q9P255 531 aa12.72□□□□□ -0.37
LRP8-202ENST00000347547 TRAV5A0A0B4J249 113 aa12.71□□□□□ -0.37
LRP8-202ENST00000347547 AP1S3Q96PC3 154 aa12.71□□□□□ -0.37
LRP8-202ENST00000347547 JMJD8Q96S16 334 aa12.71□□□□□ -0.37
LRP8-202ENST00000347547 PAXXQ9BUH6 204 aa12.71□□□□□ -0.37
LRP8-202ENST00000347547 MLST8Q9BVC4 326 aa12.71□□□□□ -0.37
LRP8-202ENST00000347547 FNDC4Q9H6D8 234 aaPredicted RBP12.71□□□□□ -0.37
LRP8-202ENST00000347547 PPIAL4DF5H284 164 aa12.71□□□□□ -0.38
LRP8-202ENST00000347547 CER1O95813 267 aa12.71□□□□□ -0.38
LRP8-202ENST00000347547 FGF6P10767 208 aa12.71□□□□□ -0.38
LRP8-202ENST00000347547 HOXA4Q00056 320 aaPredicted RBP12.71□□□□□ -0.38
LRP8-202ENST00000347547 CD69Q07108 199 aa12.71□□□□□ -0.38
LRP8-202ENST00000347547 C1orf229Q6ZS94 237 aaPredicted RBP12.71□□□□□ -0.38
LRP8-202ENST00000347547 OR5A1Q8NGJ0 315 aa12.71□□□□□ -0.38
LRP8-202ENST00000347547 CACNG8Q8WXS5 425 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms