RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 OR52E5Q8NH55 327 aa12.6□□□□□ -0.39
BRCC3-202ENST00000340647 ST8SIA2Q92186 375 aa12.6□□□□□ -0.39
BRCC3-202ENST00000340647 RBPMSQ93062 196 aaKnown RBP12.6□□□□□ -0.39
BRCC3-202ENST00000340647 TRIM63Q969Q1 353 aa12.6□□□□□ -0.39
BRCC3-202ENST00000340647 VSIRQ9H7M9 311 aa12.6□□□□□ -0.39
BRCC3-202ENST00000340647 TRAV14DV4A0A0A6YYC5 116 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 GNG7O60262 68 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 YIF1AO95070 293 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 IGKV1-17P01599 117 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 SPCS3P61009 180 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 LAMTOR1Q6IAA8 161 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 APRG1Q8IVJ8 170 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 RRNAD1Q96FB5 475 aaKnown RBP12.59□□□□□ -0.39
BRCC3-202ENST00000340647 GALNT14Q96FL9 552 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 RBM38Q9H0Z9 239 aaKnown RBP12.59□□□□□ -0.39
BRCC3-202ENST00000340647 RABL2AQ9UBK7 228 aaPredicted RBP12.59□□□□□ -0.39
BRCC3-202ENST00000340647 CACNG5Q9UF02 275 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 RABL2BQ9UNT1 228 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 C14orf166Q9Y224 244 aaKnown RBP12.59□□□□□ -0.39
BRCC3-202ENST00000340647 PUS1Q9Y606 427 aaKnown RBP eCLIP12.59□□□□□ -0.39
BRCC3-202ENST00000340647 V9GYH0 126 aa12.59□□□□□ -0.39
BRCC3-202ENST00000340647 SNCAP37840 140 aa12.58□□□□□ -0.4
BRCC3-202ENST00000340647 DHODHQ02127 395 aa12.58□□□□□ -0.4
BRCC3-202ENST00000340647 KLF9Q13886 244 aaPredicted RBP12.58□□□□□ -0.4
BRCC3-202ENST00000340647 ZNF79Q15937 498 aa12.58□□□□□ -0.4
BRCC3-202ENST00000340647 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.4
BRCC3-202ENST00000340647 FAM219AQ8IW50 185 aa12.58□□□□□ -0.4
BRCC3-202ENST00000340647 DUSP18Q8NEJ0 188 aa12.58□□□□□ -0.4
BRCC3-202ENST00000340647 MCFD2Q8NI22 146 aa12.58□□□□□ -0.4
BRCC3-202ENST00000340647 PRRT1Q99946 306 aa12.58□□□□□ -0.4
BRCC3-202ENST00000340647 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.58□□□□□ -0.4
BRCC3-202ENST00000340647 FABP12A6NFH5 140 aa12.57□□□□□ -0.4
BRCC3-202ENST00000340647 CLN5O75503 358 aa12.57□□□□□ -0.4
BRCC3-202ENST00000340647 ATG12O94817 140 aa12.57□□□□□ -0.4
BRCC3-202ENST00000340647 NXPH3O95157 252 aa12.57□□□□□ -0.4
BRCC3-202ENST00000340647 NPBWR1P48145 328 aa12.57□□□□□ -0.4
BRCC3-202ENST00000340647 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
BRCC3-202ENST00000340647 ZNF600Q6ZNG1 722 aa12.57□□□□□ -0.4
BRCC3-202ENST00000340647 WFDC3Q8IUB2 231 aa12.57□□□□□ -0.4
BRCC3-202ENST00000340647 FAM24BQ8N5W8 94 aa12.57□□□□□ -0.4
BRCC3-202ENST00000340647 OR4X1Q8NH49 305 aa12.57□□□□□ -0.4
BRCC3-202ENST00000340647 RSL24D1Q9UHA3 163 aaKnown RBP12.57□□□□□ -0.4
BRCC3-202ENST00000340647 IGKV3-7A0A075B6H7 116 aa12.56□□□□□ -0.4
BRCC3-202ENST00000340647 IGHV3-66A0A0C4DH42 116 aa12.56□□□□□ -0.4
BRCC3-202ENST00000340647 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
BRCC3-202ENST00000340647 RPL35AP18077 110 aaKnown RBP12.56□□□□□ -0.4
BRCC3-202ENST00000340647 C2orf83Q53S99 150 aa12.56□□□□□ -0.4
BRCC3-202ENST00000340647 NMSQ5H8A3 153 aa12.56□□□□□ -0.4
BRCC3-202ENST00000340647 TCF24Q7RTU0 167 aa12.56□□□□□ -0.4
BRCC3-202ENST00000340647 GBGT1Q8N5D6 347 aa12.56□□□□□ -0.4
BRCC3-202ENST00000340647 MAP6D1Q9H9H5 199 aa12.56□□□□□ -0.4
BRCC3-202ENST00000340647 DFFBO76075 338 aa12.55□□□□□ -0.4
BRCC3-202ENST00000340647 TFPI2P48307 235 aa12.55□□□□□ -0.4
BRCC3-202ENST00000340647 DEFB135Q30KP9 77 aa12.55□□□□□ -0.4
BRCC3-202ENST00000340647 TIGITQ495A1 244 aa12.55□□□□□ -0.4
BRCC3-202ENST00000340647 PRSS54Q6PEW0 395 aa12.55□□□□□ -0.4
BRCC3-202ENST00000340647 Q6ZWC4 215 aa12.55□□□□□ -0.4
BRCC3-202ENST00000340647 LYZL2Q7Z4W2 148 aa12.55□□□□□ -0.4
BRCC3-202ENST00000340647 PDCD10Q9BUL8 212 aa12.55□□□□□ -0.4
BRCC3-202ENST00000340647 KIR2DL5BA0A0G2JN68 375 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 KIR2DL5BA0A0G2JPC4 375 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 CORTO00230 105 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 OPRK1P41145 380 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 SUB1P53999 127 aaKnown RBP eCLIP12.54□□□□□ -0.4
BRCC3-202ENST00000340647 KIR2DL5AQ8N109 375 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 KIR2DL5BQ8NHK3 375 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 RNASE11Q8TAA1 199 aaKnown RBP12.54□□□□□ -0.4
BRCC3-202ENST00000340647 IL22RA2Q969J5 263 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 RNF183Q96D59 192 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 MS4A6AQ9H2W1 248 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 TP53TG1Q9Y2A0 90 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 U3KQE9 123 aa12.54□□□□□ -0.4
BRCC3-202ENST00000340647 SPRY2O43597 315 aa12.53□□□□□ -0.4
BRCC3-202ENST00000340647 IGLC1P0CG04 106 aa12.53□□□□□ -0.4
BRCC3-202ENST00000340647 CRYBB3P26998 211 aa12.53□□□□□ -0.4
BRCC3-202ENST00000340647 HTR2BP41595 481 aa12.53□□□□□ -0.4
BRCC3-202ENST00000340647 CCDC190Q86UF4 302 aa12.53□□□□□ -0.4
BRCC3-202ENST00000340647 HEYLQ9NQ87 328 aaPredicted RBP12.53□□□□□ -0.4
BRCC3-202ENST00000340647 MCUBQ9NWR8 336 aa12.53□□□□□ -0.4
BRCC3-202ENST00000340647 SCP2D1Q9UJQ7 156 aa12.53□□□□□ -0.4
BRCC3-202ENST00000340647 A0A0B4J2A0 478 aa12.52□□□□□ -0.41
BRCC3-202ENST00000340647 A0A0J9YWU9 116 aa12.52□□□□□ -0.41
BRCC3-202ENST00000340647 AKR1C4P17516 323 aa12.52□□□□□ -0.41
BRCC3-202ENST00000340647 APOC4P55056 127 aa12.52□□□□□ -0.41
BRCC3-202ENST00000340647 RBMS2Q15434 407 aaKnown RBP12.52□□□□□ -0.41
BRCC3-202ENST00000340647 SLC24A4Q8NFF2 622 aa12.52□□□□□ -0.41
BRCC3-202ENST00000340647 IL17DQ8TAD2 202 aa12.52□□□□□ -0.41
BRCC3-202ENST00000340647 GINS3Q9BRX5 216 aa12.52□□□□□ -0.41
BRCC3-202ENST00000340647 ENY2Q9NPA8 101 aa12.52□□□□□ -0.41
BRCC3-202ENST00000340647 HSPB7Q9UBY9 170 aa12.52□□□□□ -0.41
BRCC3-202ENST00000340647 SHPKQ9UHJ6 478 aa12.52□□□□□ -0.41
BRCC3-202ENST00000340647 UBE2CO00762 179 aa12.51□□□□□ -0.41
BRCC3-202ENST00000340647 PITX3O75364 302 aa12.51□□□□□ -0.41
BRCC3-202ENST00000340647 SULT1A3P0DMM9 295 aa12.51□□□□□ -0.41
BRCC3-202ENST00000340647 SULT1A4P0DMN0 295 aa12.51□□□□□ -0.41
BRCC3-202ENST00000340647 RND2P52198 227 aa12.51□□□□□ -0.41
BRCC3-202ENST00000340647 TNFRSF9Q07011 255 aa12.51□□□□□ -0.41
BRCC3-202ENST00000340647 LYG2Q86SG7 212 aa12.51□□□□□ -0.41
BRCC3-202ENST00000340647 RNASEH2CQ8TDP1 164 aaKnown RBP12.51□□□□□ -0.41
BRCC3-202ENST00000340647 KMT2AQ03164 3969 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms