RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 POLR3KQ9Y2Y1 108 aaPredicted RBP16.23■□□□□ 0.19
RIPPLY3-201ENST00000329553 INS-IGF2F8WCM5 200 aa16.23■□□□□ 0.19
RIPPLY3-201ENST00000329553 RNASE2P10153 161 aaKnown RBP16.23■□□□□ 0.19
RIPPLY3-201ENST00000329553 COL8A1P27658 744 aa16.23■□□□□ 0.19
RIPPLY3-201ENST00000329553 OR51G1Q8NGK1 321 aa16.23■□□□□ 0.19
RIPPLY3-201ENST00000329553 OR10D4PQ8NGN7 298 aa16.23■□□□□ 0.19
RIPPLY3-201ENST00000329553 TRAV20A0A0B4J274 112 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 CD24P25063 80 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 ERHP84090 104 aaKnown RBP16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 WT1-ASQ06250 92 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 TMEM249Q2WGJ8 235 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 ACOT6Q3I5F7 207 aaPredicted RBP16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 C2orf83Q53S99 150 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 ARSJQ5FYB0 599 aaPredicted RBP16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 MMD2Q8IY49 270 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 A0A1W2PN81 502 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 PAGE4O60829 102 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 CHRNA7P36544 502 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 CDC34P49427 236 aaPredicted RBP16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 LGALS4P56470 323 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 MINOS1Q5TGZ0 78 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 C1orf159Q96HA4 380 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 FBXL15Q9H469 300 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 MINOS1-NBL1R4GNA1 71 aa16.22■□□□□ 0.19
RIPPLY3-201ENST00000329553 ATP5IP56385 69 aaPredicted RBP16.21■□□□□ 0.19
RIPPLY3-201ENST00000329553 PPP1R27Q86WC6 154 aa16.21■□□□□ 0.19
RIPPLY3-201ENST00000329553 OR4X1Q8NH49 305 aa16.21■□□□□ 0.19
RIPPLY3-201ENST00000329553 NPVFQ9HCQ7 196 aa16.21■□□□□ 0.19
RIPPLY3-201ENST00000329553 DEFA4P12838 97 aa16.21■□□□□ 0.18
RIPPLY3-201ENST00000329553 UBE2E1P51965 193 aa16.21■□□□□ 0.18
RIPPLY3-201ENST00000329553 PDZD11Q5EBL8 140 aa16.21■□□□□ 0.18
RIPPLY3-201ENST00000329553 H7BYZ3 331 aa16.2■□□□□ 0.18
RIPPLY3-201ENST00000329553 SOX15O60248 233 aa16.2■□□□□ 0.18
RIPPLY3-201ENST00000329553 TNXAQ16473 311 aa16.2■□□□□ 0.18
RIPPLY3-201ENST00000329553 FBLN7Q53RD9 439 aa16.2■□□□□ 0.18
RIPPLY3-201ENST00000329553 CDPF1Q6NVV7 123 aa16.2■□□□□ 0.18
RIPPLY3-201ENST00000329553 PITPNC1Q9UKF7 332 aa16.2■□□□□ 0.18
RIPPLY3-201ENST00000329553 ABCA2Q9BZC7 2435 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 FCN1O00602 326 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 ACTL6BO94805 426 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 PAX1P15863 534 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 GALR1P47211 349 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 ANAPC16Q96DE5 110 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 EAF1Q96JC9 268 aaPredicted RBP16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 NPPCP23582 126 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 MLANAQ16655 118 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 FAM209BQ5JX69 171 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 DNLZQ5SXM8 178 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 CCDC144NLQ6NUI1 221 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 MGST2Q99735 147 aa16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 LSM4Q9Y4Z0 139 aaKnown RBP16.19■□□□□ 0.18
RIPPLY3-201ENST00000329553 FBN2P35556 2912 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 OOSP1A8MZH6 123 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 C11orf94C9JXX5 98 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 MPDU1O75352 247 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 MOSP00540 346 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 RPL27AP46776 148 aaKnown RBP16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 PAX8Q06710 450 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 MMDQ15546 238 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 NECAP1Q8NC96 275 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 AJUBAQ96IF1 538 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 OR5B12Q96R08 314 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 FABP4P15090 132 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 COMPP49747 757 aaPredicted RBP16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 GNB1P62873 340 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 GCSAMLQ5JQS6 135 aa16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 TBL2Q9Y4P3 447 aaKnown RBP16.18■□□□□ 0.18
RIPPLY3-201ENST00000329553 KMT2BQ9UMN6 2715 aaPredicted RBP16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 IGLC7A0M8Q6 106 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 REG1AP05451 166 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 SSBP2P81877 361 aaPredicted RBP16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 HES1Q14469 280 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 LURAP1LQ8IV03 231 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 ELOVL1Q9BW60 279 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 SVEP1Q4LDE5 3571 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 NAV3Q8IVL0 2385 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 HIST1H1BP16401 226 aaKnown RBP16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 OPRK1P41145 380 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 KRTAP10-9P60411 292 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 PLGLAQ15195 96 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 GGTLC1Q9BX51 225 aa16.17■□□□□ 0.18
RIPPLY3-201ENST00000329553 FNDC10F2Z333 226 aa16.16■□□□□ 0.18
RIPPLY3-201ENST00000329553 NBR2O15453 112 aa16.16■□□□□ 0.18
RIPPLY3-201ENST00000329553 PDE6DO43924 150 aa16.16■□□□□ 0.18
RIPPLY3-201ENST00000329553 TEPPQ6URK8 271 aa16.16■□□□□ 0.18
RIPPLY3-201ENST00000329553 TMEM183AQ8IXX5 376 aa16.16■□□□□ 0.18
RIPPLY3-201ENST00000329553 NPBQ8NG41 125 aa16.16■□□□□ 0.18
RIPPLY3-201ENST00000329553 HIST1H2BLQ99880 126 aa16.16■□□□□ 0.18
RIPPLY3-201ENST00000329553 PRDM13Q9H4Q3 707 aa16.16■□□□□ 0.18
RIPPLY3-201ENST00000329553 PPP5D1E7EU14 171 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 GGCTO75223 188 aaKnown RBP16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 APELAP0DMC3 54 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 CD69Q07108 199 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 OR2T10Q8NGZ9 312 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 CHD6Q8TD26 2715 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 CENPVL3A0A0U1RRI6 287 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 NDUFA3O95167 84 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 AREGP15514 252 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 SAA4P35542 130 aa16.15■□□□□ 0.18
RIPPLY3-201ENST00000329553 SRP14P37108 136 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms