RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 GDF5OSQ5U4N7 250 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 TMEM167BQ9NRX6 74 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 SPAARA0A1B0GVQ0 90 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 PRCDQ00LT1 54 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 Q6ZN92 141 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 ERASQ7Z444 233 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 NIT1Q86X76 327 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 KCNS1Q96KK3 526 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 HARBI1Q96MB7 349 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 PLSCR4Q9NRQ2 329 aa13.48□□□□□ -0.25
SSH3-201ENST00000308127 APCSP02743 223 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 RNASE2P10153 161 aaKnown RBP13.47□□□□□ -0.25
SSH3-201ENST00000308127 KIR2DS2P43631 304 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 TNFAIP6P98066 277 aaPredicted RBP13.47□□□□□ -0.25
SSH3-201ENST00000308127 STPG4Q8N801 248 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 TSKUQ8WUA8 353 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 SARAFQ96BY9 339 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 GAFA1Q96PS6 74 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 SLC25A33Q9BSK2 321 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 IGHV3-72A0A0B4J1Y9 119 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 ISLRO14498 428 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 MOSP00540 346 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 OR5G3P0C626 314 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 FAM27E3Q08E93 113 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 ST6GALNAC6Q969X2 333 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 SLC25A2Q9BXI2 301 aa13.47□□□□□ -0.25
SSH3-201ENST00000308127 ZNF324O75467 553 aaPredicted RBP13.46□□□□□ -0.25
SSH3-201ENST00000308127 ESDP10768 282 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 C11orf42Q8N5U0 333 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 KIR3DL3Q8N743 410 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 ZNF439Q8NDP4 499 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 NPIPB3Q92617 1050 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 IGF2BP2-AS1Q96M15 143 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 AMY1AP04745 511 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 C8orf88P0DMB2 117 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 TNXAQ16473 311 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 Q56UQ5 140 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 LEMD1Q68G75 181 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 ASCL2Q99929 193 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 FNDC4Q9H6D8 234 aaPredicted RBP13.46□□□□□ -0.25
SSH3-201ENST00000308127 PRNDQ9UKY0 176 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 TIMM8BQ9Y5J9 83 aaPredicted RBP13.46□□□□□ -0.25
SSH3-201ENST00000308127 ABCA4P78363 2273 aa13.46□□□□□ -0.25
SSH3-201ENST00000308127 SPTA1P02549 2419 aa13.46□□□□□ -0.26
SSH3-201ENST00000308127 TCF21O43680 179 aa13.46□□□□□ -0.26
SSH3-201ENST00000308127 LHBP01229 141 aa13.46□□□□□ -0.26
SSH3-201ENST00000308127 HINT1P49773 126 aaPredicted RBP13.46□□□□□ -0.26
SSH3-201ENST00000308127 RNASEKQ6P5S7 137 aaKnown RBP13.46□□□□□ -0.26
SSH3-201ENST00000308127 C1orf174Q8IYL3 243 aa13.46□□□□□ -0.26
SSH3-201ENST00000308127 COMMD5Q9GZQ3 224 aa13.46□□□□□ -0.26
SSH3-201ENST00000308127 ZNF331Q9NQX6 463 aaPredicted RBP13.46□□□□□ -0.26
SSH3-201ENST00000308127 TPSG1Q9NRR2 321 aa13.46□□□□□ -0.26
SSH3-201ENST00000308127 RNF7Q9UBF6 113 aa13.46□□□□□ -0.26
SSH3-201ENST00000308127 MED13LQ71F56 2210 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 PPOXP50336 477 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 CR1LQ2VPA4 569 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 Q71RC1 249 aaPredicted RBP13.45□□□□□ -0.26
SSH3-201ENST00000308127 C1orf162Q8NEQ5 155 aaPredicted RBP13.45□□□□□ -0.26
SSH3-201ENST00000308127 FAM167A-AS1Q96KT0 104 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 CLEC7AQ9BXN2 247 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 AMMECR1Q9Y4X0 333 aaPredicted RBP13.45□□□□□ -0.26
SSH3-201ENST00000308127 PTPRZ1P23471 2315 aaPredicted RBP13.45□□□□□ -0.26
SSH3-201ENST00000308127 DPRXA6NFQ7 191 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 HYPMO75409 117 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 IGHV1-46P01743 117 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 ORM2P19652 201 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 FOXA3P55318 350 aaPredicted RBP13.45□□□□□ -0.26
SSH3-201ENST00000308127 RTL8BQ17RB0 113 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 HCP5Q6MZN7 132 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 H1FXQ92522 213 aaKnown RBP13.45□□□□□ -0.26
SSH3-201ENST00000308127 RNF2Q99496 336 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 OSTCQ9NRP0 149 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 CLEC5AQ9NY25 188 aa13.45□□□□□ -0.26
SSH3-201ENST00000308127 SLC25A10Q9UBX3 287 aaPredicted RBP13.45□□□□□ -0.26
SSH3-201ENST00000308127 CEP295Q9C0D2 2601 aa13.44□□□□□ -0.26
SSH3-201ENST00000308127 COX7A2P2O60397 106 aa13.44□□□□□ -0.26
SSH3-201ENST00000308127 CD69Q07108 199 aa13.44□□□□□ -0.26
SSH3-201ENST00000308127 TCF24Q7RTU0 167 aa13.44□□□□□ -0.26
SSH3-201ENST00000308127 C18orf32Q8TCD1 76 aa13.44□□□□□ -0.26
SSH3-201ENST00000308127 RITA1Q96K30 269 aa13.44□□□□□ -0.26
SSH3-201ENST00000308127 GSX1Q9H4S2 264 aaPredicted RBP13.44□□□□□ -0.26
SSH3-201ENST00000308127 CACNA1BQ00975 2339 aa13.44□□□□□ -0.26
SSH3-201ENST00000308127 PATE2Q6UY27 113 aa13.44□□□□□ -0.26
SSH3-201ENST00000308127 ZNF841Q6ZN19 808 aa13.44□□□□□ -0.26
SSH3-201ENST00000308127 MCRIP2Q9BUT9 160 aaKnown RBP13.44□□□□□ -0.26
SSH3-201ENST00000308127 VWC2LB2RUY7 222 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 TAS2R45P59539 299 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 WT1-ASQ06250 92 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 MZT1Q08AG7 82 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 STUMQ69YW2 141 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 DEFB124Q8NES8 71 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 NUP35Q8NFH5 326 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 NUDT10Q8NFP7 164 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 OR2D3Q8NGH3 330 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 CORO2AQ92828 525 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 NUDT11Q96G61 164 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 SLC35E1Q96K37 410 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 SH3BGRL2Q9UJC5 107 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 TRAV9-1A0A075B6T8 112 aa13.43□□□□□ -0.26
SSH3-201ENST00000308127 SIAH2O43255 324 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms