RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 OR10W1Q8NGF6 305 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 GAFA1Q96PS6 74 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 RBFOX2O43251 390 aaKnown RBP eCLIP5.87□□□□□ -1.47
RAG1-201ENST00000299440 RNF151Q2KHN1 245 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 PAPPA-AS1Q5QFB9 102 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 TMEM170BQ5T4T1 132 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 HEPN1Q6WQI6 88 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 RNASEH2CQ8TDP1 164 aaKnown RBP5.87□□□□□ -1.47
RAG1-201ENST00000299440 OOSP1A8MZH6 123 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 TMEM183BQ1AE95 376 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 C5orf64Q2M2E5 130 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 TMEM183AQ8IXX5 376 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 SLC50A1Q9BRV3 221 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 DEFB131AP59861 70 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 PNRC1Q12796 327 aaPredicted RBP5.87□□□□□ -1.47
RAG1-201ENST00000299440 DMRTC2Q8IXT2 367 aaPredicted RBP5.87□□□□□ -1.47
RAG1-201ENST00000299440 LRTM2Q8N967 370 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 LMO1P25800 156 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 PPIFP30405 207 aaKnown RBP5.87□□□□□ -1.47
RAG1-201ENST00000299440 ZNF497Q6ZNH5 498 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 RALGAPA1Q6GYQ0 2036 aa5.87□□□□□ -1.47
RAG1-201ENST00000299440 IGHV2-70DA0A0C4DH43 119 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 HLA-DQB1P01920 261 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 BCL2P10415 239 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 CXCL3P19876 107 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 IRF3Q14653 427 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 IQCJQ1A5X6 159 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 PVRIGQ6DKI7 326 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 ZNF383Q8NA42 475 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 SEPSECSQ9HD40 501 aaKnown RBP5.86□□□□□ -1.47
RAG1-201ENST00000299440 XCL2Q9UBD3 114 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 HGFACQ04756 655 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 SIGIRRQ6IA17 410 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 LINC00469Q8N7U9 141 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 C5orf66Q9H5L9 145 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 SIPA1L1O43166 1804 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 SOD3P08294 240 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 ATP5IP56385 69 aaPredicted RBP5.86□□□□□ -1.47
RAG1-201ENST00000299440 TFF3Q07654 80 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 FOXL1Q12952 345 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 COX19Q49B96 90 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 DEFB104AQ8WTQ1 72 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 SMIM8Q96KF7 97 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 Q9H3A6 140 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 NIT2Q9NQR4 276 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 TRAV12-3A0A0B4J271 114 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 RAMP3O60896 148 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 TNFSF13O75888 250 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 CA1P00915 261 aaPredicted RBP5.86□□□□□ -1.47
RAG1-201ENST00000299440 CGAP01215 116 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 PRTN3P24158 256 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 GCHFRP30047 84 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 UBE2E1P51965 193 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 APOC4P55056 127 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 B3GALT5-AS1P59052 145 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 TMEM187Q14656 261 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 ZNF660Q6AZW8 331 aaPredicted RBP5.86□□□□□ -1.47
RAG1-201ENST00000299440 C19orf24Q9BVV8 132 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 PKDREJQ9NTG1 2253 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 HEATR5BQ9P2D3 2071 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 MDKP21741 143 aaPredicted RBP5.86□□□□□ -1.47
RAG1-201ENST00000299440 FAM74A3Q4VXF1 159 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 KLF2Q9Y5W3 355 aaPredicted RBP5.86□□□□□ -1.47
RAG1-201ENST00000299440 V9GYH0 126 aa5.86□□□□□ -1.47
RAG1-201ENST00000299440 C7orf66A4D0T2 115 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 C7orf71A4D174 169 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 INSP01308 110 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 TMEM249Q2WGJ8 235 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 OR4D5Q8NGN0 318 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 ISOC2Q96AB3 205 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 SLC25A38Q96DW6 304 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 USMG5Q96IX5 58 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 TMEM70Q9BUB7 260 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 RHPN1-AS1Q9BWJ2 59 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 A0A1B0GTI1 187 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 ADARB2-AS1A8MUL3 147 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 CEACAM8P31997 349 aaPredicted RBP5.85□□□□□ -1.47
RAG1-201ENST00000299440 PRCDQ00LT1 54 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 AWAT1Q58HT5 328 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 CHAC2Q8WUX2 184 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 SPSB4Q96A44 273 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 SLC25A39Q9BZJ4 359 aaPredicted RBP5.85□□□□□ -1.47
RAG1-201ENST00000299440 ATRXP46100 2492 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 MED12Q93074 2177 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 TRAV21A0A0B4J279 112 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 H3BQ15 152 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 J3QR89 54 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 CFHR2P36980 270 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 CYB561D1Q8N8Q1 229 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 MARVELD1Q9BSK0 173 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 IGHV4-30-2A0A087WSY4 118 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 IFITM10A6NMD0 228 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 DEFB112Q30KQ8 113 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 NXT2Q9NPJ8 142 aaKnown RBP5.85□□□□□ -1.47
RAG1-201ENST00000299440 FAM215AQ9Y5M1 114 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 C15orf61A6NNL5 157 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 PEX7O00628 323 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 SEC11BP0C7V7 166 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 LINC00114Q6XXX2 140 aa5.85□□□□□ -1.47
RAG1-201ENST00000299440 GTF2H5Q6ZYL4 71 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms