RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 A0A1B0GWB2 263 aa14□□□□□ -0.17
CNTNAP3-201ENST00000297668 UBE2CO00762 179 aa14□□□□□ -0.17
CNTNAP3-201ENST00000297668 MST1P26927 711 aa14□□□□□ -0.17
CNTNAP3-201ENST00000297668 RIPPLY3P57055 190 aa14□□□□□ -0.17
CNTNAP3-201ENST00000297668 TMEM101Q96IK0 257 aa14□□□□□ -0.17
CNTNAP3-201ENST00000297668 JKAMPQ9P055 326 aa14□□□□□ -0.17
CNTNAP3-201ENST00000297668 EPDR1Q9UM22 224 aa14□□□□□ -0.17
CNTNAP3-201ENST00000297668 SLX1AQ9BQ83 275 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 TMEM133Q9H2Q1 129 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 CRYGSP22914 178 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 PLAURQ03405 335 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 PVRIGQ6DKI7 326 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 ARID2Q68CP9 1835 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 RNF125Q96EQ8 232 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 SSBP4Q9BWG4 385 aaPredicted RBP13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 WFDC1Q9HC57 220 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 IGKV1-12A0A0C4DH73 117 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 C19orf67A6NJJ6 358 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST1H2BKO60814 126 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 IGKV1D-12P01611 117 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 TFF1P04155 84 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST1H2BJP06899 126 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST1H2BOP23527 126 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST1H2BBP33778 126 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 ADMP35318 185 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST1H2BDP58876 126 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST1H2BCP62807 126 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST2H2BEQ16778 126 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST1H2BHQ93079 126 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST1H2BNQ99877 126 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 HIST1H2BMQ99879 126 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 MESP1Q9BRJ9 268 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 C2orf88Q9BSF0 95 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 C7orf69Q9H7B7 122 aa13.99□□□□□ -0.17
CNTNAP3-201ENST00000297668 TCRBV4S1A1TA0A5B7 111 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 IGHV3-11P01762 117 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 PYYP10082 97 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 ZNF418Q8TF45 676 aaPredicted RBP13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 FAM168AQ92567 244 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 DUX3Q96PT4 197 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 ASCL2Q99929 193 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 SPTAN1Q13813 2472 aaKnown RBP13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 PRCDQ00LT1 54 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 OCC1Q8TAD7 63 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 FGFBP3Q8TAT2 258 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 ITLN2Q8WWU7 325 aaPredicted RBP13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 LAMTOR2Q9Y2Q5 125 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 SCN8AQ9UQD0 1980 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 ZNF236Q9UL36 1845 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 PGPEP1LA6NFU8 196 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 FAM71F2Q6NXP2 309 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 APOMO95445 188 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 TMEM50AO95807 157 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 EFNB3Q15768 340 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 NUP37Q8NFH4 326 aa13.98□□□□□ -0.17
CNTNAP3-201ENST00000297668 OR9G9P0C7N8 305 aa13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 ZCCHC24Q8N2G6 241 aaKnown RBP13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 SPCS1Q9Y6A9 102 aa13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 PAX1P15863 534 aa13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 FBLN7Q53RD9 439 aa13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 LHFPL1Q86WI0 220 aa13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 CRIPAKQ8N1N5 446 aa13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 SLC50A1Q9BRV3 221 aa13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 RNASE4P34096 147 aaKnown RBP13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 EFNA2O43921 213 aa13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 ZFP36L1Q07352 338 aaKnown RBP13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 MEGF9Q9H1U4 602 aa13.97□□□□□ -0.17
CNTNAP3-201ENST00000297668 WNK2Q9Y3S1 2297 aa13.96□□□□□ -0.17
CNTNAP3-201ENST00000297668 PRB3Q04118 309 aaPredicted RBP13.96□□□□□ -0.17
CNTNAP3-201ENST00000297668 CADP27708 2225 aa13.96□□□□□ -0.17
CNTNAP3-201ENST00000297668 GREB1LQ9C091 1923 aaPredicted RBP13.96□□□□□ -0.17
CNTNAP3-201ENST00000297668 DOCK4Q8N1I0 1966 aa13.96□□□□□ -0.17
CNTNAP3-201ENST00000297668 H3BRM9 83 aa13.96□□□□□ -0.17
CNTNAP3-201ENST00000297668 VCX2Q9H322 139 aa13.96□□□□□ -0.17
CNTNAP3-201ENST00000297668 NBASA2RRP1 2371 aa13.96□□□□□ -0.17
CNTNAP3-201ENST00000297668 TEX38Q6PEX7 206 aa13.96□□□□□ -0.17
CNTNAP3-201ENST00000297668 BRCA1P38398 1863 aaKnown RBP13.96□□□□□ -0.18
CNTNAP3-201ENST00000297668 FAM90A9PA6NNJ1 464 aa13.96□□□□□ -0.18
CNTNAP3-201ENST00000297668 LEPP41159 167 aa13.96□□□□□ -0.18
CNTNAP3-201ENST00000297668 NDUFA3O95167 84 aa13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 PSG8Q9UQ74 426 aa13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 PINLYPA6NC86 204 aa13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 RNASE6Q93091 150 aaKnown RBP13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 CDKN1AP38936 164 aa13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 C10orf126Q8N4M7 172 aa13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 TSPAN13O95857 204 aa13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 CD5P06127 495 aa13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 CFHR1Q03591 330 aa13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 HEPN1Q6WQI6 88 aa13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 VSIRQ9H7M9 311 aa13.95□□□□□ -0.18
CNTNAP3-201ENST00000297668 IGHV1-18A0A0C4DH31 117 aa13.94□□□□□ -0.18
CNTNAP3-201ENST00000297668 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.94□□□□□ -0.18
CNTNAP3-201ENST00000297668 CD24P25063 80 aa13.94□□□□□ -0.18
CNTNAP3-201ENST00000297668 ANAPC13Q9BS18 74 aa13.94□□□□□ -0.18
CNTNAP3-201ENST00000297668 SUPT4H1P63272 117 aaKnown RBP13.94□□□□□ -0.18
CNTNAP3-201ENST00000297668 OR4X2Q8NGF9 303 aa13.94□□□□□ -0.18
CNTNAP3-201ENST00000297668 PLXNA1Q9UIW2 1896 aa13.94□□□□□ -0.18
CNTNAP3-201ENST00000297668 PATJQ8NI35 1801 aa13.94□□□□□ -0.18
CNTNAP3-201ENST00000297668 TGFAP01135 160 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms