RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 Q0VFX4 171 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 ZNF497Q6ZNH5 498 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 CIARTQ8N365 385 aaPredicted RBP12.83□□□□□ -0.36
FNDC1-201ENST00000297267 MRPL32Q9BYC8 188 aaKnown RBP12.83□□□□□ -0.36
FNDC1-201ENST00000297267 MT-ND6P03923 174 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 COX6CP09669 75 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 MEGF9Q9H1U4 602 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 NRN1Q9NPD7 142 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 C21orf62Q9NYP8 219 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 TRAV40A0A0B4J280 105 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 E9PLN8 166 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 TMEM50AO95807 157 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 VKORC1Q9BQB6 163 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 NHP2Q9NX24 153 aaKnown RBP12.83□□□□□ -0.36
FNDC1-201ENST00000297267 TNFSF10P50591 281 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 MGAMO43451 1857 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 TRGV2A0A075B6R0 118 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 OR10J3Q5JRS4 329 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 TRAV30A0A087WSZ9 112 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A10PA6NDY2 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A18PA6NE21 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A16PA6NEW6 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A20PA6NIJ5 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A8PA6NJQ4 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A7PA6NKC0 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A22PA8MWA6 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A12PA8MX19 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A5PA8MXJ8 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A23PA8MXZ1 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A15PP0C7V4 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A13PP0C7W8 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A14PP0C7W9 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A24PP0C7X0 464 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 TIMP3P35625 211 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 TIMM23BQ5SRD1 257 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 SCRT1Q9BWW7 348 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 COL25A1Q9BXS0 654 aaPredicted RBP12.82□□□□□ -0.36
FNDC1-201ENST00000297267 STAG3L2P0CL84 134 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 Q8TAT8 98 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 ASXL3Q9C0F0 2248 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 hDV102S1A0JD36 115 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 TIMM23O14925 209 aa12.82□□□□□ -0.36
FNDC1-201ENST00000297267 A0A1B0GUS0 222 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 FAM90A26D6RGX4 464 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 A8MXK9 166 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 COQ2Q96H96 371 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 FMC1Q96HJ9 113 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 J3QRE1 110 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 GTSCR1Q86UQ5 136 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 GBF1Q92538 1859 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 IZUMO1RA6ND01 250 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 C19orf24Q9BVV8 132 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 RPL35AP18077 110 aaKnown RBP12.81□□□□□ -0.36
FNDC1-201ENST00000297267 ZNF415Q09FC8 603 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 NIT1Q86X76 327 aa12.81□□□□□ -0.36
FNDC1-201ENST00000297267 GLRXP35754 106 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 RIPPLY2Q5TAB7 128 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 VMO1Q7Z5L0 202 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 NPFFR1Q9GZQ6 430 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 FREM3P0C091 2139 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 KIF26BQ2KJY2 2108 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 IQCF6A8MYZ5 107 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 C17orf100A8MU93 164 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 LDLRAD2Q5SZI1 272 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 FAM57AQ8TBR7 257 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 HS3ST6Q96QI5 342 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 GDF15Q99988 308 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 DPM3Q9P2X0 92 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 SPCS1Q9Y6A9 102 aa12.8□□□□□ -0.36
FNDC1-201ENST00000297267 CIRBPQ14011 172 aaKnown RBP12.79□□□□□ -0.36
FNDC1-201ENST00000297267 JOSD1Q15040 202 aaPredicted RBP12.79□□□□□ -0.36
FNDC1-201ENST00000297267 EFNB3Q15768 340 aa12.79□□□□□ -0.36
FNDC1-201ENST00000297267 A0A1B0GUT8 65 aa12.79□□□□□ -0.36
FNDC1-201ENST00000297267 ERCC8Q13216 396 aa12.79□□□□□ -0.36
FNDC1-201ENST00000297267 ALPK2Q86TB3 2170 aa12.79□□□□□ -0.36
FNDC1-201ENST00000297267 OR5A1Q8NGJ0 315 aa12.79□□□□□ -0.36
FNDC1-201ENST00000297267 IMMP1LQ96LU5 166 aa12.79□□□□□ -0.36
FNDC1-201ENST00000297267 TCRAP04437 139 aa12.79□□□□□ -0.36
FNDC1-201ENST00000297267 RHOGP84095 191 aa12.79□□□□□ -0.36
FNDC1-201ENST00000297267 Q71RC1 249 aaPredicted RBP12.79□□□□□ -0.36
FNDC1-201ENST00000297267 TMEM101Q96IK0 257 aa12.79□□□□□ -0.36
FNDC1-201ENST00000297267 SMDT1Q9H4I9 107 aa12.79□□□□□ -0.36
FNDC1-201ENST00000297267 DNM1P46Q6ZS02 220 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 STHQ8IWL8 128 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 ALKBH7Q9BT30 221 aaPredicted RBP12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST1H2BKO60814 126 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST1H2BJP06899 126 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST1H2BOP23527 126 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST1H2BBP33778 126 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST1H2BDP58876 126 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST1H2BCP62807 126 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST2H2BEQ16778 126 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.78□□□□□ -0.36
FNDC1-201ENST00000297267 SAPCD1Q5SSQ6 148 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 LCN12Q6JVE5 192 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST1H2BHQ93079 126 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST1H2BNQ99877 126 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 HIST1H2BMQ99879 126 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 CLPSP04118 112 aa12.78□□□□□ -0.36
FNDC1-201ENST00000297267 UCP1P25874 307 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms