RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 PHLDA3Q9Y5J5 127 aa12.05□□□□□ -0.48
PTPRO-201ENST00000281171 C9JAW5 83 aa12.05□□□□□ -0.48
PTPRO-201ENST00000281171 IL18BPO95998 194 aa12.05□□□□□ -0.48
PTPRO-201ENST00000281171 IL11P20809 199 aa12.05□□□□□ -0.48
PTPRO-201ENST00000281171 S100A7L2Q5SY68 101 aa12.05□□□□□ -0.48
PTPRO-201ENST00000281171 ARPC1AQ92747 370 aa12.05□□□□□ -0.48
PTPRO-201ENST00000281171 SRSF8Q9BRL6 282 aaKnown RBP12.05□□□□□ -0.48
PTPRO-201ENST00000281171 A0A1B0GUS0 222 aa12.05□□□□□ -0.48
PTPRO-201ENST00000281171 SPAARA0A1B0GVQ0 90 aa12.05□□□□□ -0.48
PTPRO-201ENST00000281171 SLC25A45Q8N413 288 aa12.05□□□□□ -0.48
PTPRO-201ENST00000281171 ZNF71Q9NQZ8 489 aaPredicted RBP12.05□□□□□ -0.48
PTPRO-201ENST00000281171 ZIC3O60481 467 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 SP9P0CG40 484 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 COX8AP10176 69 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 CCL21O00585 134 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 SYNGR3O43761 229 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 SUPT4H1P63272 117 aaKnown RBP12.04□□□□□ -0.48
PTPRO-201ENST00000281171 LOXL3P58215 753 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 PLAURQ03405 335 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 LINC00305Q7Z4B0 112 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 WDR31Q8NA23 367 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 VGLL1Q99990 258 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 YPEL3P61236 119 aaPredicted RBP12.04□□□□□ -0.48
PTPRO-201ENST00000281171 HIST1H4AP62805 103 aaKnown RBP12.04□□□□□ -0.48
PTPRO-201ENST00000281171 ZNF319Q9P2F9 582 aa12.04□□□□□ -0.48
PTPRO-201ENST00000281171 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
PTPRO-201ENST00000281171 GREB1LQ9C091 1923 aaPredicted RBP12.03□□□□□ -0.48
PTPRO-201ENST00000281171 ZNF638Q14966 1978 aaKnown RBP12.03□□□□□ -0.48
PTPRO-201ENST00000281171 COX6A1P12074 109 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 PLNP26678 52 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 LHFPL1Q86WI0 220 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 WDR90Q96KV7 1748 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 TDRD15B5MCY1 1934 aaKnown RBP12.03□□□□□ -0.48
PTPRO-201ENST00000281171 C5orf47Q569G3 176 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 Q6ZVH6 145 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 DLL3Q9NYJ7 618 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 PARP14Q460N5 1801 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 PATE3B3GLJ2 98 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 G3V4G9 280 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 SRSF1Q07955 248 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPRO-201ENST00000281171 SIGLEC12Q96PQ1 595 aa12.03□□□□□ -0.48
PTPRO-201ENST00000281171 COLQQ9Y215 455 aaPredicted RBP12.03□□□□□ -0.48
PTPRO-201ENST00000281171 H3BMM0 161 aa12.02□□□□□ -0.48
PTPRO-201ENST00000281171 C1orf162Q8NEQ5 155 aaPredicted RBP12.02□□□□□ -0.48
PTPRO-201ENST00000281171 UBE2WQ96B02 151 aa12.02□□□□□ -0.48
PTPRO-201ENST00000281171 TEX48A0A1B0GUV7 120 aa12.02□□□□□ -0.48
PTPRO-201ENST00000281171 PCOLCEQ15113 449 aa12.02□□□□□ -0.48
PTPRO-201ENST00000281171 LHFPL6Q9Y693 200 aa12.02□□□□□ -0.49
PTPRO-201ENST00000281171 ZNFX1Q9P2E3 1918 aaKnown RBP12.02□□□□□ -0.49
PTPRO-201ENST00000281171 OR2H2O95918 312 aa12.02□□□□□ -0.49
PTPRO-201ENST00000281171 TMEM54Q969K7 222 aa12.02□□□□□ -0.49
PTPRO-201ENST00000281171 JPT1Q9UK76 154 aa12.02□□□□□ -0.49
PTPRO-201ENST00000281171 SLC25A15Q9Y619 301 aa12.02□□□□□ -0.49
PTPRO-201ENST00000281171 M0R2P5 195 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 IGKV3-11P04433 115 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 PTGDSP41222 190 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 IGHV3-21A0A0B4J1V1 117 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 TRAV21A0A0B4J279 112 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 TIAF1O95411 115 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 TMEM229AB2RXF0 380 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 RPP25LQ8N5L8 163 aaKnown RBP12.01□□□□□ -0.49
PTPRO-201ENST00000281171 FBXL15Q9H469 300 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 MOB4Q9Y3A3 225 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 NDUFC2O95298 119 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 MPV17P39210 176 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 RPL27AP46776 148 aaKnown RBP12.01□□□□□ -0.49
PTPRO-201ENST00000281171 CSRP2Q16527 193 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 FSCN3Q9NQT6 498 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 H3BTX0 84 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 SLC25A48Q6ZT89 311 aaKnown RBP12.01□□□□□ -0.49
PTPRO-201ENST00000281171 MRAPQ8TCY5 172 aa12.01□□□□□ -0.49
PTPRO-201ENST00000281171 COL4A1P02462 1669 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 FAM106CPP0CH98 169 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 SCN10AQ9Y5Y9 1956 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 A0A1W2PRD5 423 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 A0A1W2PRF3 423 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 A0A1W2PRM7 423 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 CT83Q5H943 113 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 TRAV24A0A0B4J272 114 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 WDR83OSQ9Y284 106 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 AGFG2O95081 481 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 C1QL2Q7Z5L3 287 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 C18orf32Q8TCD1 76 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 NPIPB3Q92617 1050 aa12□□□□□ -0.49
PTPRO-201ENST00000281171 ORMDL2Q53FV1 153 aa11.99□□□□□ -0.49
PTPRO-201ENST00000281171 SIVA1O15304 175 aa11.99□□□□□ -0.49
PTPRO-201ENST00000281171 NPFFR1Q9GZQ6 430 aa11.99□□□□□ -0.49
PTPRO-201ENST00000281171 RBX1P62877 108 aa11.99□□□□□ -0.49
PTPRO-201ENST00000281171 IFI27L2Q9H2X8 130 aa11.99□□□□□ -0.49
PTPRO-201ENST00000281171 RNF115Q9Y4L5 304 aa11.99□□□□□ -0.49
PTPRO-201ENST00000281171 TOMM40O96008 361 aa11.99□□□□□ -0.49
PTPRO-201ENST00000281171 TCTEX1D4Q5JR98 221 aa11.99□□□□□ -0.49
PTPRO-201ENST00000281171 TRBV7-9A0A0J9YWB2 115 aa11.98□□□□□ -0.49
PTPRO-201ENST00000281171 IGKV1D-42A0A075B6H8 117 aa11.98□□□□□ -0.49
PTPRO-201ENST00000281171 SPINK2P20155 84 aa11.98□□□□□ -0.49
PTPRO-201ENST00000281171 OR9G1Q8NH87 305 aa11.98□□□□□ -0.49
PTPRO-201ENST00000281171 IDI2-AS1Q9NZ38 188 aa11.98□□□□□ -0.49
PTPRO-201ENST00000281171 CCDC88CQ9P219 2028 aa11.98□□□□□ -0.49
PTPRO-201ENST00000281171 IGHV1-24A0A0C4DH33 117 aa11.98□□□□□ -0.49
PTPRO-201ENST00000281171 LINC01549A6NIU2 74 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms