RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 WI2-2373I1.2A0A1W2PRP0 233 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 C2orf70A6NJV1 201 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 FAM90A26D6RGX4 464 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 SYNGR2O43760 224 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 CSN3P07498 182 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 SLC25A6P12236 298 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 FOLR2P14207 255 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 GP9P14770 177 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 EDN2P20800 178 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 NKX2-1P43699 371 aaPredicted RBP4.98□□□□□ -1.61
CD44-204ENST00000279452 RND2P52198 227 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 S100A10P60903 97 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 POLR2GP62487 172 aaKnown RBP eCLIP4.98□□□□□ -1.61
CD44-204ENST00000279452 RPP30P78346 268 aaKnown RBP4.98□□□□□ -1.61
CD44-204ENST00000279452 IFITM3Q01628 133 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 EGFEM1PQ0D2K5 195 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 KLK9Q2XQG4 91 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 AARDQ4LEZ3 155 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 PDLIM3Q53GG5 364 aaPredicted RBP4.98□□□□□ -1.61
CD44-204ENST00000279452 TM4SF20Q53R12 229 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 C2orf83Q53S99 150 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 SPANXN5Q5MJ07 72 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 ETFRF1Q6IPR1 90 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 LCN12Q6JVE5 192 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 BTNL8Q6UX41 500 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 UNQ9165/PRO28630Q6UXU0 137 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 SLC16A13Q7RTY0 426 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 GPHB5Q86YW7 130 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 C12orf45Q8N5I9 185 aaPredicted RBP4.98□□□□□ -1.61
CD44-204ENST00000279452 RNASEH2CQ8TDP1 164 aaKnown RBP4.98□□□□□ -1.61
CD44-204ENST00000279452 MITD1Q8WV92 249 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 TMEM190Q8WZ59 177 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 SLC35E1Q96K37 410 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 CIB3Q96Q77 187 aaPredicted RBP4.98□□□□□ -1.61
CD44-204ENST00000279452 TXN2Q99757 166 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 KLK9Q9UKQ9 250 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 U3KQ87 197 aa4.98□□□□□ -1.61
CD44-204ENST00000279452 IGHV3-49A0A0A0MS15 119 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 TMEM213A2RRL7 107 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 SMCO3A2RU48 225 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 F8W735 103 aaPredicted RBP4.97□□□□□ -1.61
CD44-204ENST00000279452 INMT-MINDY4F8WBC2 141 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 L7N2F9 121 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 LGALS9O00182 355 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 NDUFA4O00483 81 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 GOSR2O14653 212 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 WIPF1O43516 503 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 SSNA1O43805 119 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 PITX3O75364 302 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 IGLV1-51P01701 117 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 CTSGP08311 255 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 SLC25A4P12235 298 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 CBLN1P23435 193 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 ADMP35318 185 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 BCAP31P51572 246 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 VAMP2P63027 116 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 MLANAQ16655 118 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 BSXQ3C1V8 233 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 TIGITQ495A1 244 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 CD300EQ496F6 205 aaPredicted RBP4.97□□□□□ -1.61
CD44-204ENST00000279452 GSG1LQ6UXU4 331 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 RBPMS2Q6ZRY4 209 aaKnown RBP4.97□□□□□ -1.61
CD44-204ENST00000279452 GTSCR1Q86UQ5 136 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 ZBTB8BQ8NAP8 495 aaPredicted RBP4.97□□□□□ -1.61
CD44-204ENST00000279452 OR10C1Q96KK4 312 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 ATP6V0BQ99437 205 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 GINS3Q9BRX5 216 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 FNDC4Q9H6D8 234 aaPredicted RBP4.97□□□□□ -1.61
CD44-204ENST00000279452 DAZ1Q9NQZ3 744 aaKnown RBP4.97□□□□□ -1.61
CD44-204ENST00000279452 PSENENQ9NZ42 101 aa4.97□□□□□ -1.61
CD44-204ENST00000279452 STRAPQ9Y3F4 350 aaKnown RBP4.97□□□□□ -1.61
CD44-204ENST00000279452 LSM5Q9Y4Y9 91 aaKnown RBP4.97□□□□□ -1.61
CD44-204ENST00000279452 PUS1Q9Y606 427 aaKnown RBP eCLIP4.97□□□□□ -1.61
CD44-204ENST00000279452 FBN3Q75N90 2809 aa4.96□□□□□ -1.61
CD44-204ENST00000279452 IGKV3-7A0A075B6H7 116 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 IGHV3OR16-13A0A075B7E8 117 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 TRAV30A0A087WSZ9 112 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 IGHV3-74A0A0B4J1X5 117 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 IGHV3-66A0A0C4DH42 116 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 ZFP92A6NM28 416 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 A8MWP6 167 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 K7EIL1 84 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 PRAF2O60831 178 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 CLN5O75503 358 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 SCAF4O95104 1147 aaKnown RBP4.96□□□□□ -1.62
CD44-204ENST00000279452 TMEM50AO95807 157 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 OR10J1P30954 320 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 FCGR2BP31994 310 aaPredicted RBP4.96□□□□□ -1.62
CD44-204ENST00000279452 BMI1P35226 326 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 CAV2P51636 162 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 RPL11P62913 178 aaKnown RBP4.96□□□□□ -1.62
CD44-204ENST00000279452 AKR1C1Q04828 323 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 CD69Q07108 199 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 OR8G2PQ6IF36 304 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 PRSS54Q6PEW0 395 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 IL34Q6ZMJ4 242 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 ZNF600Q6ZNG1 722 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 OR4D5Q8NGN0 318 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 OR1S2Q8NGQ3 325 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 OR4X1Q8NH49 305 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms