RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 IFNA4P05014 189 aa9.35□□□□□ -0.91
CD44-203ENST00000278386 RNASE2P10153 161 aaKnown RBP9.35□□□□□ -0.91
CD44-203ENST00000278386 LHFPL1Q86WI0 220 aa9.35□□□□□ -0.91
CD44-203ENST00000278386 LILRB2Q8N423 598 aa9.35□□□□□ -0.91
CD44-203ENST00000278386 ARRDC1Q8N5I2 433 aa9.35□□□□□ -0.91
CD44-203ENST00000278386 FAM24BQ8N5W8 94 aa9.35□□□□□ -0.91
CD44-203ENST00000278386 OR52I2Q8NH67 350 aa9.35□□□□□ -0.91
CD44-203ENST00000278386 NARS2Q96I59 477 aaKnown RBP9.35□□□□□ -0.91
CD44-203ENST00000278386 METTL26Q96S19 204 aa9.35□□□□□ -0.91
CD44-203ENST00000278386 NAA50Q9GZZ1 169 aaKnown RBP9.35□□□□□ -0.91
CD44-203ENST00000278386 EXTL2Q9UBQ6 330 aa9.35□□□□□ -0.91
CD44-203ENST00000278386 TRAV2A0A0B4J234 112 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 A0A1B0GU03 582 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 A0A1W2PS18 150 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 TMEM50AO95807 157 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 P0C879 139 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 TBPP20226 339 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 NPPCP23582 126 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 ETV6P41212 452 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 SP6Q3SY56 376 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 LGALS9CQ6DKI2 356 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 ZFAND1Q8TCF1 268 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 TMEM230Q96A57 120 aa9.34□□□□□ -0.91
CD44-203ENST00000278386 INS-IGF2F8WCM5 200 aa9.33□□□□□ -0.92
CD44-203ENST00000278386 CLN5O75503 358 aa9.33□□□□□ -0.92
CD44-203ENST00000278386 ZNF688P0C7X2 276 aa9.33□□□□□ -0.92
CD44-203ENST00000278386 P2RY1P47900 373 aa9.33□□□□□ -0.92
CD44-203ENST00000278386 OR4D10Q8NGI6 311 aa9.33□□□□□ -0.92
CD44-203ENST00000278386 OR13C8Q8NGS7 320 aa9.33□□□□□ -0.92
CD44-203ENST00000278386 C2CD4CQ8TF44 421 aa9.33□□□□□ -0.92
CD44-203ENST00000278386 FNDC4Q9H6D8 234 aaPredicted RBP9.33□□□□□ -0.92
CD44-203ENST00000278386 MRPL36Q9P0J6 103 aaKnown RBP9.33□□□□□ -0.92
CD44-203ENST00000278386 MTFP1Q9UDX5 166 aa9.33□□□□□ -0.92
CD44-203ENST00000278386 C14orf166Q9Y224 244 aaKnown RBP9.33□□□□□ -0.92
CD44-203ENST00000278386 DNAH10Q8IVF4 4471 aa9.33□□□□□ -0.92
CD44-203ENST00000278386 A0A0G2JRQ6 117 aa9.32□□□□□ -0.92
CD44-203ENST00000278386 RPS10-NUDT3A0A1W2PQS6 291 aa9.32□□□□□ -0.92
CD44-203ENST00000278386 RAB3DO95716 219 aa9.32□□□□□ -0.92
CD44-203ENST00000278386 UCP1P25874 307 aa9.32□□□□□ -0.92
CD44-203ENST00000278386 TAS2R19P59542 299 aa9.32□□□□□ -0.92
CD44-203ENST00000278386 TIGITQ495A1 244 aa9.32□□□□□ -0.92
CD44-203ENST00000278386 MARCH1Q8TCQ1 289 aa9.32□□□□□ -0.92
CD44-203ENST00000278386 GRAMD2BQ96HH9 432 aa9.32□□□□□ -0.92
CD44-203ENST00000278386 KNCNA6PVL3 124 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 K7EQG2 157 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 B3GALNT1O75752 331 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 OR5AC1P0C628 307 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 ZNF182P17025 639 aaPredicted RBP9.31□□□□□ -0.92
CD44-203ENST00000278386 CTF1Q16619 201 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 FAAP20Q6NZ36 180 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 STEAP1BQ6NZ63 245 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 TMEM229BQ8NBD8 167 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 OR4X1Q8NH49 305 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 TERB2Q8NHR7 220 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 C15orf40Q8WUR7 153 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 HECTD4Q9Y4D8 3996 aa9.31□□□□□ -0.92
CD44-203ENST00000278386 IGHV4-28A0A0C4DH34 117 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 TEX13DA0A0J9YY54 714 aaPredicted RBP9.3□□□□□ -0.92
CD44-203ENST00000278386 RGS5O15539 181 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 GABARAPO95166 117 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 CD74P04233 296 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 SPP1P10451 314 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 C4BPBP20851 252 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 CRYBB3P26998 211 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 HTR2BP41595 481 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 RPL5P46777 297 aaKnown RBP9.3□□□□□ -0.92
CD44-203ENST00000278386 ALDH3B2P48448 385 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 EIF2B2P49770 351 aaKnown RBP9.3□□□□□ -0.92
CD44-203ENST00000278386 SPCS3P61009 180 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 MLANAQ16655 118 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 TMEM41BQ5BJD5 291 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 PVRIGQ6DKI7 326 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 MORN3Q6PF18 240 aaPredicted RBP9.3□□□□□ -0.92
CD44-203ENST00000278386 TRPT1Q86TN4 253 aaKnown RBP9.3□□□□□ -0.92
CD44-203ENST00000278386 FAM219AQ8IW50 185 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 CENPSQ8N2Z9 138 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 Q8NAQ8 132 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 OR1S2Q8NGQ3 325 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 ABHD1Q96SE0 405 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 TMEM222Q9H0R3 208 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 HEYLQ9NQ87 328 aaPredicted RBP9.3□□□□□ -0.92
CD44-203ENST00000278386 CACNG5Q9UF02 275 aa9.3□□□□□ -0.92
CD44-203ENST00000278386 VPS13DQ5THJ4 4388 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 TRAV30A0A087WSZ9 112 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 CEBPZOSA8MTT3 80 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 IGLL5B9A064 214 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 GABARAPH6UMI1 98 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 NXPH3O95157 252 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 IGKV1-17P01599 117 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 HNRNPCP07910 306 aaKnown RBP eCLIP9.29□□□□□ -0.92
CD44-203ENST00000278386 RND2P52198 227 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 DHRS2Q13268 280 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 MEF2DQ14814 521 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 BSXQ3C1V8 233 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 ACTL10Q5JWF8 245 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 GPR107Q5VW38 600 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 SLC24A4Q8NFF2 622 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 LHFPL5Q8TAF8 219 aa9.29□□□□□ -0.92
CD44-203ENST00000278386 RBPMSQ93062 196 aaKnown RBP9.29□□□□□ -0.92
CD44-203ENST00000278386 MRPS26Q9BYN8 205 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms