RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 Q9UFV3 132 aa13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MUC21A0A0G2JKD1 596 aa13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 MUC21A0A140T8X8 626 aa13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 H0YJW9 148 aa13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 PRRG2O14669 202 aa13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 TOX4O94842 621 aa13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 REG1AP05451 166 aa13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 MUC21Q5SSG8 566 aa13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 BHLHA15Q7RTS1 189 aaPredicted RBP13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 ZNF439Q8NDP4 499 aa13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 GGTLC1Q9BX51 225 aa13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 SELENOKQ9Y6D0 94 aa13.08□□□□□ -0.32
MAP1LC3B-201ENST00000268607 TRGV8A0A0C4DH27 118 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 LINC00473A8K010 186 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 CX3CL1P78423 397 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 PSG9Q00887 426 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 MRPL54Q6P161 138 aaKnown RBP13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 EBLN2Q6P2I7 272 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 OR4P4Q8NGL7 312 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 PLPPR2Q96GM1 343 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 TRGV10A0A0A0MS01 117 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 OR9G9P0C7N8 305 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 WDR82Q6UXN9 313 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 GALMQ96C23 342 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 CLUHP3Q96NS8 147 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 DCTN5Q9BTE1 182 aa13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 HRNRQ86YZ3 2850 aaPredicted RBP13.07□□□□□ -0.32
MAP1LC3B-201ENST00000268607 C9JCJ5 164 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 SPRNQ5BIV9 151 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 WDR73Q6P4I2 378 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 ZBTB34Q8NCN2 500 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 OR2Z1Q8NG97 314 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 KCNIP1Q9NZI2 227 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 ANKHD1Q8IWZ3 2542 aaKnown RBP13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 IGHV3-43A0A0B4J1X8 118 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 C12orf77C9JDV5 145 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 MT-ND6P03923 174 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 IGHV3-43DP0DP04 118 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 LTC4SQ16873 150 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 CENPWQ5EE01 88 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 BVES-AS1Q5T3Y7 98 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 DEFB125Q8N687 156 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 CXXC4Q9H2H0 198 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 DEFB108AA8MXU0 73 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 M0R1B8 84 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 GOSR1O95249 250 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 UCNP55089 124 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 TNXAQ16473 311 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 PQLC2Q6ZP29 291 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 S100A7AQ86SG5 101 aa13.06□□□□□ -0.32
MAP1LC3B-201ENST00000268607 TRAV8-6A0A0B4J262 113 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 MPDU1O75352 247 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 CA7P43166 264 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 GNG4P50150 75 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 RHOBP62745 196 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 ACP7Q6ZNF0 438 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 SPATA12Q7Z6I5 190 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 TMEM238LA0A1B0GVL6 79 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 FAM181BA6NEQ2 426 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 GATA2P23769 480 aaPredicted RBP13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 SSTR5P35346 364 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 EDDM3AQ14507 147 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 EFNB3Q15768 340 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 FAM71F2Q6NXP2 309 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 C1orf162Q8NEQ5 155 aaPredicted RBP13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 TNFRSF14Q92956 283 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 C11orf52Q96A22 123 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 COQ2Q96H96 371 aa13.05□□□□□ -0.32
MAP1LC3B-201ENST00000268607 IGLV1-44P01699 117 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 CRYBB3P26998 211 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 SMIM21Q3B7S5 101 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 ABHD12Q8N2K0 398 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 HES4Q9HCC6 221 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 HEYLQ9NQ87 328 aaPredicted RBP13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 SLC25A15Q9Y619 301 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 LY96Q9Y6Y9 160 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 VPS13CQ709C8 3753 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 HELTA6NFD8 242 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 IGHV3-13P01766 116 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 IGHV3-7P01780 117 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 HBZP02008 142 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 SELENOVP59797 346 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 ASPHD1Q5U4P2 390 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 KIR3DL3Q8N743 410 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 LRRC29Q8WV35 223 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 NINJ1Q92982 152 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 CSMD2Q7Z408 3487 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 ZNF462Q96JM2 2506 aa13.04□□□□□ -0.32
MAP1LC3B-201ENST00000268607 IGHV3OR15-7A0A075B7D8 119 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 TMEM30CPA0ZSE6 113 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 HSBP1O75506 76 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 CDSNQ15517 529 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 C1orf159Q96HA4 380 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 M0R1X1 148 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 M0R2Z0 102 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 AMY1AP04745 511 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 NPY1RP25929 384 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 VKORC1L1Q8N0U8 176 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms