RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 DKK1O94907 266 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 COL5A1-AS1Q5SY13 56 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 IGFL3Q6UXB1 125 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 OR10AG1Q8NH19 301 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 UQCR10Q9UDW1 63 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 PHLDA3Q9Y5J5 127 aa13.77□□□□□ -0.2
PHRF1-201ENST00000264555 TMEM170AQ8WVE7 144 aa13.77□□□□□ -0.21
PHRF1-201ENST00000264555 SCGB1C2P0DMR2 95 aa13.77□□□□□ -0.21
PHRF1-201ENST00000264555 SCGB1D4Q6XE38 83 aa13.77□□□□□ -0.21
PHRF1-201ENST00000264555 ATG101Q9BSB4 218 aa13.77□□□□□ -0.21
PHRF1-201ENST00000264555 OSTCQ9NRP0 149 aa13.77□□□□□ -0.21
PHRF1-201ENST00000264555 GPX1P07203 203 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 ADIPOQQ15848 244 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 SYT8Q8NBV8 401 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 OCC1Q8TAD7 63 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 RNF166Q96A37 237 aaPredicted RBP13.76□□□□□ -0.21
PHRF1-201ENST00000264555 EPDR1Q9UM22 224 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 IGHV3OR16-13A0A075B7E8 117 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 IGHV3-74A0A0B4J1X5 117 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 BTF3P20290 206 aaKnown RBP13.76□□□□□ -0.21
PHRF1-201ENST00000264555 TMEM167AQ8TBQ9 72 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 ESPL1Q14674 2120 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 MGST2Q99735 147 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 DPRXA6NFQ7 191 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 PYYP10082 97 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 PRSS8Q16651 343 aa13.76□□□□□ -0.21
PHRF1-201ENST00000264555 ITGB1BP1O14713 200 aa13.75□□□□□ -0.21
PHRF1-201ENST00000264555 C3orf36Q3SXR2 165 aa13.75□□□□□ -0.21
PHRF1-201ENST00000264555 RNASE7Q9H1E1 156 aaKnown RBP13.75□□□□□ -0.21
PHRF1-201ENST00000264555 WIPF3A6NGB9 483 aa13.75□□□□□ -0.21
PHRF1-201ENST00000264555 CIARTQ8N365 385 aaPredicted RBP13.75□□□□□ -0.21
PHRF1-201ENST00000264555 RNF125Q96EQ8 232 aa13.75□□□□□ -0.21
PHRF1-201ENST00000264555 A0A0G2JLM5 398 aa13.75□□□□□ -0.21
PHRF1-201ENST00000264555 H0YJW9 148 aa13.75□□□□□ -0.21
PHRF1-201ENST00000264555 ZNF25P17030 456 aaPredicted RBP13.75□□□□□ -0.21
PHRF1-201ENST00000264555 ZNF841Q6ZN19 808 aa13.75□□□□□ -0.21
PHRF1-201ENST00000264555 LIME1Q9H400 295 aa13.75□□□□□ -0.21
PHRF1-201ENST00000264555 TRBV24-1A0A075B6N3 115 aa13.75□□□□□ -0.21
PHRF1-201ENST00000264555 A0A1B0GUT8 65 aa13.75□□□□□ -0.21
PHRF1-201ENST00000264555 FBLL1A6NHQ2 334 aaKnown RBP13.74□□□□□ -0.21
PHRF1-201ENST00000264555 C10orf55Q5SWW7 151 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 Q6AWC8 147 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 CD24P25063 80 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 ERVK11-1P61568 191 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 RNF5Q99942 180 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 C7orf69Q9H7B7 122 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST1H2BKO60814 126 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST1H2BJP06899 126 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST1H2BOP23527 126 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST1H2BBP33778 126 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 FOXA3P55318 350 aaPredicted RBP13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST1H2BDP58876 126 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 LINC00205P59089 165 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST1H2BCP62807 126 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST2H2BEQ16778 126 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.74□□□□□ -0.21
PHRF1-201ENST00000264555 TEX38Q6PEX7 206 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST1H2BHQ93079 126 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST1H2BNQ99877 126 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 HIST1H2BMQ99879 126 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 KIF26AQ9ULI4 1882 aaPredicted RBP13.74□□□□□ -0.21
PHRF1-201ENST00000264555 ZNF407Q9C0G0 2248 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 A0A1B0GW15 77 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 C15orf62A8K5M9 175 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 TNFSF13O75888 250 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 NMUP48645 174 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 CLEC19AQ6UXS0 136 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 COL25A1Q9BXS0 654 aaPredicted RBP13.74□□□□□ -0.21
PHRF1-201ENST00000264555 GNG5P63218 68 aa13.74□□□□□ -0.21
PHRF1-201ENST00000264555 PGPEP1LA6NFU8 196 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 LY6DQ14210 128 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 C8orf46Q8TAG6 207 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 IGHV1-3A0A0C4DH29 117 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 FAM209BQ5JX69 171 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 ZNF106Q9H2Y7 1883 aaKnown RBP13.73□□□□□ -0.21
PHRF1-201ENST00000264555 HIGD1CA8MV81 97 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 LYRM7Q5U5X0 104 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 WDR86Q86TI4 376 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 UBE2CO00762 179 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 MST1LQ2TV78 715 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 LEMD1Q68G75 181 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 AP5S1Q9NUS5 200 aa13.73□□□□□ -0.21
PHRF1-201ENST00000264555 COL4A3Q01955 1670 aa13.72□□□□□ -0.21
PHRF1-201ENST00000264555 IGHV3-66A0A0C4DH42 116 aa13.72□□□□□ -0.21
PHRF1-201ENST00000264555 Q6ZR03 302 aa13.72□□□□□ -0.21
PHRF1-201ENST00000264555 IGHV3-49A0A0A0MS15 119 aa13.72□□□□□ -0.21
PHRF1-201ENST00000264555 SEPSECSQ9HD40 501 aaKnown RBP13.72□□□□□ -0.21
PHRF1-201ENST00000264555 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.72□□□□□ -0.21
PHRF1-201ENST00000264555 TSPOP30536 169 aa13.72□□□□□ -0.21
PHRF1-201ENST00000264555 DMRTA2Q96SC8 542 aa13.72□□□□□ -0.21
PHRF1-201ENST00000264555 LRRK1Q38SD2 2015 aa13.72□□□□□ -0.21
PHRF1-201ENST00000264555 GATA4P43694 442 aa13.72□□□□□ -0.21
PHRF1-201ENST00000264555 SNRPD3P62318 126 aaKnown RBP13.72□□□□□ -0.21
PHRF1-201ENST00000264555 FAM71F2Q6NXP2 309 aa13.72□□□□□ -0.21
PHRF1-201ENST00000264555 C1QL4Q86Z23 238 aa13.72□□□□□ -0.21
PHRF1-201ENST00000264555 ZNF207O43670 478 aaKnown RBP13.71□□□□□ -0.21
PHRF1-201ENST00000264555 HIST1H1AQ02539 215 aaPredicted RBP13.71□□□□□ -0.21
PHRF1-201ENST00000264555 SPATA31B1PQ5VZV4 182 aa13.71□□□□□ -0.21
PHRF1-201ENST00000264555 TBL2Q9Y4P3 447 aaKnown RBP13.71□□□□□ -0.21
PHRF1-201ENST00000264555 AGMATQ9BSE5 352 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms