RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TMEM116Q8NCL8 245 aa18■□□□□ 0.47
SMARCB1-201ENST00000263121 FAM110DQ8TAY7 271 aaPredicted RBP18■□□□□ 0.47
SMARCB1-201ENST00000263121 CITED4Q96RK1 184 aa18■□□□□ 0.47
SMARCB1-201ENST00000263121 K7EIM0 57 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 OR10J1P30954 320 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 PRR20EP86478 221 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 PRR20CP86479 221 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 PRR20DP86480 221 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 PRR20BP86481 221 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 PRR20AP86496 221 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 ZNF726P1Q15940 193 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 KLK9Q2XQG4 91 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 AKIRIN2Q53H80 203 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 UNQ5815/PRO19632Q6UWF5 114 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 RPP25LQ8N5L8 163 aaKnown RBP17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 KLK9Q9UKQ9 250 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 IGKV1D-37A0A075B6S9 117 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 NUDT19A8MXV4 375 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 YIF1AO95070 293 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 TSPAN15O95858 294 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 H2AFB1P0C5Y9 115 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 M6PRP20645 277 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 FLNAP21333 2647 aaKnown RBP17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 ECSCRQ19T08 205 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 SPNS3Q6ZMD2 512 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 IL34Q6ZMJ4 242 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 IL17RELQ6ZVW7 336 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 EIF4E3Q8N5X7 224 aaKnown RBP17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 STPG3Q8N7X2 389 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 OR5T1Q8NG75 326 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 MARC2Q969Z3 335 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 RCC1LQ96I51 464 aaKnown RBP17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 TMUB1Q9BVT8 246 aa17.99■□□□□ 0.47
SMARCB1-201ENST00000263121 IGHV3-21A0A0B4J1V1 117 aa17.98■□□□□ 0.47
SMARCB1-201ENST00000263121 IGHG2P01859 326 aa17.98■□□□□ 0.47
SMARCB1-201ENST00000263121 ACOT6Q3I5F7 207 aaPredicted RBP17.98■□□□□ 0.47
SMARCB1-201ENST00000263121 C19orf54Q5BKX5 351 aa17.98■□□□□ 0.47
SMARCB1-201ENST00000263121 SPSB3Q6PJ21 355 aa17.98■□□□□ 0.47
SMARCB1-201ENST00000263121 OR10G4Q8NGN3 311 aa17.98■□□□□ 0.47
SMARCB1-201ENST00000263121 OR10G9Q8NGN4 311 aa17.98■□□□□ 0.47
SMARCB1-201ENST00000263121 OR10G7Q8NGN6 311 aa17.98■□□□□ 0.47
SMARCB1-201ENST00000263121 BTBD17A6NE02 478 aa17.97■□□□□ 0.47
SMARCB1-201ENST00000263121 CYB5BO43169 146 aa17.97■□□□□ 0.47
SMARCB1-201ENST00000263121 LINC00869P0C866 280 aa17.97■□□□□ 0.47
SMARCB1-201ENST00000263121 B2MP61769 119 aa17.97■□□□□ 0.47
SMARCB1-201ENST00000263121 SSX7Q7RTT5 188 aa17.97■□□□□ 0.47
SMARCB1-201ENST00000263121 SLC39A9Q9NUM3 307 aa17.97■□□□□ 0.47
SMARCB1-201ENST00000263121 VPREB3Q9UKI3 123 aa17.97■□□□□ 0.47
SMARCB1-201ENST00000263121 G3V318 75 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 IGF1P05019 195 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 BLCAPP62952 87 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 C9orf152Q5JTZ5 239 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 CYP2G1PQ6ZSU1 146 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 MBD3L1Q8WWY6 194 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 TRAV1-1A0A0B4J248 108 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 RAB19A4D1S5 217 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 GCSAMLQ5JQS6 135 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 SLC35E3Q7Z769 313 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 BPIFCQ8NFQ6 507 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 OR4X1Q8NH49 305 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 YAE1D1Q9NRH1 226 aa17.96■□□□□ 0.47
SMARCB1-201ENST00000263121 TCRBV4S1A1TA0A5B7 111 aa17.95■□□□□ 0.46
SMARCB1-201ENST00000263121 SFT2D1Q8WV19 159 aa17.95■□□□□ 0.46
SMARCB1-201ENST00000263121 TRAV41A0A0B4J266 112 aa17.94■□□□□ 0.46
SMARCB1-201ENST00000263121 ZFP92A6NM28 416 aa17.94■□□□□ 0.46
SMARCB1-201ENST00000263121 SEC14L6B5MCN3 397 aa17.94■□□□□ 0.46
SMARCB1-201ENST00000263121 HOXA3O43365 443 aaPredicted RBP17.94■□□□□ 0.46
SMARCB1-201ENST00000263121 HIST1H1BP16401 226 aaKnown RBP17.94■□□□□ 0.46
SMARCB1-201ENST00000263121 COMMD1Q8N668 190 aa17.94■□□□□ 0.46
SMARCB1-201ENST00000263121 TRGV9Q99603 122 aa17.94■□□□□ 0.46
SMARCB1-201ENST00000263121 ACTR3CQ9C0K3 210 aaPredicted RBP17.94■□□□□ 0.46
SMARCB1-201ENST00000263121 THYN1Q9P016 225 aa17.94■□□□□ 0.46
SMARCB1-201ENST00000263121 CTXND1A0A1B0GTU2 59 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 HBE1P02100 147 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 FAM122CQ6P4D5 195 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 Q6ZS46 218 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 SLC25A22Q9H936 323 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 TNFRSF19Q9NS68 423 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 NDUFB8O95169 186 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 S100A1P23297 94 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 GATA2P23769 480 aaPredicted RBP17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 SRP14P37108 136 aaKnown RBP17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 CCL20P78556 96 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 ZNF90Q03938 601 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 SIGLECL1Q8N7X8 197 aa17.93■□□□□ 0.46
SMARCB1-201ENST00000263121 TRBV9A0A0B4J1U6 114 aa17.92■□□□□ 0.46
SMARCB1-201ENST00000263121 A0A1B0GV50 99 aa17.92■□□□□ 0.46
SMARCB1-201ENST00000263121 MAP1LC3B2A6NCE7 125 aa17.92■□□□□ 0.46
SMARCB1-201ENST00000263121 OR2J3O76001 311 aa17.92■□□□□ 0.46
SMARCB1-201ENST00000263121 SELENOTP62341 195 aa17.92■□□□□ 0.46
SMARCB1-201ENST00000263121 LCN15Q6UWW0 184 aa17.92■□□□□ 0.46
SMARCB1-201ENST00000263121 MAP1LC3BQ9GZQ8 125 aa17.92■□□□□ 0.46
SMARCB1-201ENST00000263121 CLN5O75503 358 aa17.91■□□□□ 0.46
SMARCB1-201ENST00000263121 IGLC1P0CG04 106 aa17.91■□□□□ 0.46
SMARCB1-201ENST00000263121 CDC34P49427 236 aaPredicted RBP17.91■□□□□ 0.46
SMARCB1-201ENST00000263121 UQCC3Q6UW78 93 aa17.91■□□□□ 0.46
SMARCB1-201ENST00000263121 RAB24Q969Q5 203 aa17.91■□□□□ 0.46
SMARCB1-201ENST00000263121 FBXL7Q9UJT9 491 aa17.91■□□□□ 0.46
SMARCB1-201ENST00000263121 ZNF580Q9UK33 172 aa17.91■□□□□ 0.46
SMARCB1-201ENST00000263121 GSX1Q9H4S2 264 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms