RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 RELQ04864 619 aaPredicted RBP14.19□□□□□ -0.14
TRAM1-201ENST00000262213 RTL8BQ17RB0 113 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 COX19Q49B96 90 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 SPACA3Q8IXA5 215 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 CBY1Q9Y3M2 126 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 CACNA1GO43497 2377 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 COX7A2P2O60397 106 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 PMCHL1Q16048 86 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 C1orf162Q8NEQ5 155 aaPredicted RBP14.19□□□□□ -0.14
TRAM1-201ENST00000262213 NUP35Q8NFH5 326 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 NUDT10Q8NFP7 164 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 NUDT11Q96G61 164 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 FAM167A-AS1Q96KT0 104 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 ZNF71Q9NQZ8 489 aaPredicted RBP14.19□□□□□ -0.14
TRAM1-201ENST00000262213 ARL2-SNX15V9GYD0 113 aa14.19□□□□□ -0.14
TRAM1-201ENST00000262213 E7EUB6 86 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 KLF3P57682 345 aaPredicted RBP14.18□□□□□ -0.14
TRAM1-201ENST00000262213 CD69Q07108 199 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 ST6GALNAC6Q969X2 333 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 ADTRPQ96IZ2 230 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 RAI1Q7Z5J4 1906 aaPredicted RBP14.18□□□□□ -0.14
TRAM1-201ENST00000262213 ABCA1O95477 2261 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 CFAP47Q6ZTR5 3102 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 SH2D7A6NKC9 451 aaPredicted RBP14.18□□□□□ -0.14
TRAM1-201ENST00000262213 M0QZ24 198 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 C10orf55Q5SWW7 151 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 EBLN2Q6P2I7 272 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 KIR3DL3Q8N743 410 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 BLNKQ8WV28 456 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 COMMD5Q9GZQ3 224 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 PPP1R14DQ9NXH3 145 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 CLEC5AQ9NY25 188 aa14.18□□□□□ -0.14
TRAM1-201ENST00000262213 C20orf202A1L168 122 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 PTTG1IPP53801 180 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 C2orf83Q53S99 150 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 C19orf35Q6ZS72 473 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 KLHDC1Q8N7A1 406 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.17□□□□□ -0.14
TRAM1-201ENST00000262213 PAXXQ9BUH6 204 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 PRR33A8MZF0 331 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 IGHG3P01860 377 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 CRYABP02511 175 aaKnown RBP14.17□□□□□ -0.14
TRAM1-201ENST00000262213 TSPOP30536 169 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 SELENOVP59797 346 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 ERASQ7Z444 233 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 OR2D3Q8NGH3 330 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 HARBI1Q96MB7 349 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 MRPL20Q9BYC9 149 aaKnown RBP14.17□□□□□ -0.14
TRAM1-201ENST00000262213 SLC25A15Q9Y619 301 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 FAM181BA6NEQ2 426 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 FNDC10F2Z333 226 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 PCP4P48539 62 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 TBR1Q16650 682 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 NPIPB3Q92617 1050 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 ZNF257Q9Y2Q1 563 aa14.17□□□□□ -0.14
TRAM1-201ENST00000262213 HIGD1CA8MV81 97 aa14.16□□□□□ -0.14
TRAM1-201ENST00000262213 PEX7O00628 323 aa14.16□□□□□ -0.14
TRAM1-201ENST00000262213 PLSCR4Q9NRQ2 329 aa14.16□□□□□ -0.14
TRAM1-201ENST00000262213 H3BTX0 84 aa14.16□□□□□ -0.14
TRAM1-201ENST00000262213 LHBP01229 141 aa14.16□□□□□ -0.14
TRAM1-201ENST00000262213 REG1AP05451 166 aa14.16□□□□□ -0.14
TRAM1-201ENST00000262213 ZNF883P0CG24 379 aa14.16□□□□□ -0.14
TRAM1-201ENST00000262213 FOXA3P55318 350 aaPredicted RBP14.16□□□□□ -0.14
TRAM1-201ENST00000262213 C10orf113Q5VZT2 155 aa14.16□□□□□ -0.14
TRAM1-201ENST00000262213 TCF24Q7RTU0 167 aa14.16□□□□□ -0.14
TRAM1-201ENST00000262213 ZNF329Q86UD4 541 aa14.16□□□□□ -0.14
TRAM1-201ENST00000262213 SMG1Q96Q15 3661 aaKnown RBP14.15□□□□□ -0.14
TRAM1-201ENST00000262213 CCL25O15444 150 aa14.15□□□□□ -0.14
TRAM1-201ENST00000262213 WT1P19544 449 aaPredicted RBP14.15□□□□□ -0.14
TRAM1-201ENST00000262213 POU2AF1Q16633 256 aa14.15□□□□□ -0.14
TRAM1-201ENST00000262213 SARAFQ96BY9 339 aa14.15□□□□□ -0.14
TRAM1-201ENST00000262213 GAFA1Q96PS6 74 aa14.15□□□□□ -0.14
TRAM1-201ENST00000262213 TNFRSF19Q9NS68 423 aa14.15□□□□□ -0.14
TRAM1-201ENST00000262213 RNF7Q9UBF6 113 aa14.15□□□□□ -0.14
TRAM1-201ENST00000262213 M0R296 226 aa14.15□□□□□ -0.14
TRAM1-201ENST00000262213 TNFAIP6P98066 277 aaPredicted RBP14.15□□□□□ -0.14
TRAM1-201ENST00000262213 SPATA12Q7Z6I5 190 aa14.15□□□□□ -0.14
TRAM1-201ENST00000262213 DYSFO75923 2080 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 CDX4O14627 284 aaPredicted RBP14.14□□□□□ -0.15
TRAM1-201ENST00000262213 CFHR2P36980 270 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 ERHP84090 104 aaKnown RBP14.14□□□□□ -0.15
TRAM1-201ENST00000262213 OR1L8Q8NGR8 309 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 GRAMD2BQ96HH9 432 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 RAB9BQ9NP90 201 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 DLL1O00548 723 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 ITGB1BP1O14713 200 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 IGLL1P15814 213 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 ORM2P19652 201 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 PATE2Q6UY27 113 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 ZNF841Q6ZN19 808 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 OR8B2Q96RD0 313 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 C19orf24Q9BVV8 132 aa14.14□□□□□ -0.15
TRAM1-201ENST00000262213 MRPL32Q9BYC8 188 aaKnown RBP14.14□□□□□ -0.15
TRAM1-201ENST00000262213 FNDC4Q9H6D8 234 aaPredicted RBP14.14□□□□□ -0.15
TRAM1-201ENST00000262213 VWC2LB2RUY7 222 aa14.13□□□□□ -0.15
TRAM1-201ENST00000262213 APELAP0DMC3 54 aa14.13□□□□□ -0.15
TRAM1-201ENST00000262213 UBE2G1P62253 170 aa14.13□□□□□ -0.15
TRAM1-201ENST00000262213 RBMXL3Q8N7X1 1067 aaKnown RBP14.13□□□□□ -0.15
TRAM1-201ENST00000262213 OR5B3Q8NH48 314 aa14.13□□□□□ -0.15
TRAM1-201ENST00000262213 ALKBH7Q9BT30 221 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms