RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ZNFX1Q9P2E3 1918 aaKnown RBP3.34□□□□□ -1.87
RNF38-201ENST00000259605 LOC389332A0A1B0GUA5 103 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 RBFOX3A6NFN3 312 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 CTAG2O75638 210 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 TTRP02766 147 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 NBEAP1P0C6P0 100 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 WT1P19544 449 aaPredicted RBP3.34□□□□□ -1.87
RNF38-201ENST00000259605 MST1P26927 711 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 BSXQ3C1V8 233 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 LRP11Q86VZ4 500 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 LYZL4Q96KX0 146 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 NDUFAF3Q9BU61 184 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 KRTAP17-1Q9BYP8 105 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 MAST2Q6P0Q8 1798 aa3.34□□□□□ -1.87
RNF38-201ENST00000259605 ASCC3Q8N3C0 2202 aaKnown RBP3.34□□□□□ -1.88
RNF38-201ENST00000259605 TCHHQ07283 1943 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 A0A1B0GWB2 263 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 LINC01548A6NM66 108 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 E7EQL1 145 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 PEX7O00628 323 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 CD74P04233 296 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 CD28P10747 220 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 TMEM50BP56557 158 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 TIAL1Q01085 375 aaKnown RBP eCLIP3.34□□□□□ -1.88
RNF38-201ENST00000259605 ALKAL2Q6UX46 152 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 ZNF493Q6ZR52 646 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 LINC00305Q7Z4B0 112 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 FGFRL1Q8N441 504 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 PPP1R1CQ8WVI7 109 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 LEAP2Q969E1 77 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 RBM38Q9H0Z9 239 aaKnown RBP3.34□□□□□ -1.88
RNF38-201ENST00000259605 CLEC2DQ9UHP7 191 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 LINC00527Q9UJ94 153 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 DTX4Q9Y2E6 619 aa3.34□□□□□ -1.88
RNF38-201ENST00000259605 POLEQ07864 2286 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 IGLV3-32A0A0A0MS00 114 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 DPRXA6NFQ7 191 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 F6UB75 175 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 PLA2G2AP14555 144 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 FSTP19883 344 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 LOXL1Q08397 574 aaPredicted RBP3.33□□□□□ -1.88
RNF38-201ENST00000259605 PRR30Q53SZ7 412 aaPredicted RBP3.33□□□□□ -1.88
RNF38-201ENST00000259605 SPAG8Q99932 426 aaPredicted RBP3.33□□□□□ -1.88
RNF38-201ENST00000259605 OVOL2Q9BRP0 275 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 SPXQ9BT56 116 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 PTPRQQ9UMZ3 2332 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 NCOR1O75376 2440 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 PKD1L3Q7Z443 1732 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 NINQ8N4C6 2090 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 IGKV1OR2-108A0A075B7D4 117 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 SPINK4O60575 86 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 SMIM10L1P0DMW3 83 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 SPNP16150 400 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 TIRAPP58753 221 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 RPL24P83731 157 aaKnown RBP3.33□□□□□ -1.88
RNF38-201ENST00000259605 FOXE3Q13461 319 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 TCTEX1D4Q5JR98 221 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 OR2K2Q8NGT1 345 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 SMIM10Q96HG1 83 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 SCGB3A1Q96QR1 104 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 CYSLTR1Q9Y271 337 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 CACNA1HO95180 2353 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 SEC16AO15027 2179 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 A0A087WWC5 75 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 IGHV1-3A0A0C4DH29 117 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 SRRM5B3KS81 715 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 IGLL5B9A064 214 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 OVOL3O00110 214 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 SOCS1O15524 211 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 BCL2L11O43521 198 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 LYPD3O95274 346 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 PLNP26678 52 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 UBE2D1P51668 147 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 ANXA2RQ3ZCQ2 193 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 FAM201AQ5SY85 155 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 RIMKLAQ8IXN7 391 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 OR4D11Q8NGI4 311 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 FGFBP3Q8TAT2 258 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 NABP2Q9BQ15 211 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 OTORQ9NRC9 128 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 FRRS1LQ9P0K9 344 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 CLDN16Q9Y5I7 305 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 MYH6P13533 1939 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 TRAV8-1A0A0A6YYK1 113 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 C12orf77C9JDV5 145 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 F2Z2F3 143 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 H3BVH4 76 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 FOXL2P58012 376 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 FCN2Q15485 313 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 IBA57Q5T440 356 aaKnown RBP3.33□□□□□ -1.88
RNF38-201ENST00000259605 C8orf82Q6P1X6 216 aaPredicted RBP3.33□□□□□ -1.88
RNF38-201ENST00000259605 ZNF843Q8N446 348 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 VOPP1Q96AW1 172 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 MRPL13Q9BYD1 178 aaKnown RBP3.33□□□□□ -1.88
RNF38-201ENST00000259605 MS4A6AQ9H2W1 248 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 SIGLEC8Q9NYZ4 499 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 KLF12Q9Y4X4 402 aa3.33□□□□□ -1.88
RNF38-201ENST00000259605 TRAV25A0A0B4J276 109 aa3.32□□□□□ -1.88
RNF38-201ENST00000259605 LDLRAD4O15165 306 aa3.32□□□□□ -1.88
RNF38-201ENST00000259605 NDUFS6O75380 124 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms