RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 IGKV1-12A0A0C4DH73 117 aa15.54■□□□□ 0.08
SMARCC1-201ENST00000254480 C5orf63A6NC05 138 aa15.54■□□□□ 0.08
SMARCC1-201ENST00000254480 IGKV1D-12P01611 117 aa15.54■□□□□ 0.08
SMARCC1-201ENST00000254480 EVI2AP22794 236 aa15.54■□□□□ 0.08
SMARCC1-201ENST00000254480 CYB5R2Q6BCY4 276 aa15.54■□□□□ 0.08
SMARCC1-201ENST00000254480 BTCP35070 178 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 ZNF585BQ52M93 769 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 SLC25A28Q96A46 364 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 FMC1Q96HJ9 113 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 MPDZO75970 2070 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 APOMO95445 188 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 JOSD1Q15040 202 aaPredicted RBP15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 MRPS18CQ9Y3D5 142 aaKnown RBP15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 NEUROG3Q9Y4Z2 214 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 TP53BP1Q12888 1972 aaPredicted RBP15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 TRBV9A0A0B4J1U6 114 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 C15orf61A6NNL5 157 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 CA1P00915 261 aaPredicted RBP15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 VSIRQ9H7M9 311 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 SDF2L1Q9HCN8 221 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 MRPL16Q9NX20 251 aaKnown RBP15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 FREM3P0C091 2139 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 YPEL1O60688 119 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 TDGF1P13385 188 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 Q0VFX4 171 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 RNASEH2CQ8TDP1 164 aaKnown RBP15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 YPEL2Q96QA6 119 aa15.53■□□□□ 0.08
SMARCC1-201ENST00000254480 DNAL4O96015 105 aa15.52■□□□□ 0.08
SMARCC1-201ENST00000254480 GNLYP22749 145 aa15.52■□□□□ 0.08
SMARCC1-201ENST00000254480 BRD3OSQ6XYD6 125 aa15.52■□□□□ 0.08
SMARCC1-201ENST00000254480 CRIPAKQ8N1N5 446 aa15.52■□□□□ 0.08
SMARCC1-201ENST00000254480 GFI1Q99684 422 aa15.52■□□□□ 0.08
SMARCC1-201ENST00000254480 A0A1B0GV90 55 aa15.52■□□□□ 0.08
SMARCC1-201ENST00000254480 RNF125Q96EQ8 232 aa15.52■□□□□ 0.08
SMARCC1-201ENST00000254480 CADP27708 2225 aa15.52■□□□□ 0.07
SMARCC1-201ENST00000254480 TMEM183AQ8IXX5 376 aa15.52■□□□□ 0.07
SMARCC1-201ENST00000254480 NPFFR1Q9GZQ6 430 aa15.52■□□□□ 0.07
SMARCC1-201ENST00000254480 NTN3O00634 580 aaPredicted RBP15.51■□□□□ 0.07
SMARCC1-201ENST00000254480 TMEM50AO95807 157 aa15.51■□□□□ 0.07
SMARCC1-201ENST00000254480 LEPP41159 167 aa15.51■□□□□ 0.07
SMARCC1-201ENST00000254480 GGNQ86UU5 652 aa15.51■□□□□ 0.07
SMARCC1-201ENST00000254480 METRNQ9UJH8 293 aa15.51■□□□□ 0.07
SMARCC1-201ENST00000254480 TCRBV4S1A1TA0A5B7 111 aa15.51■□□□□ 0.07
SMARCC1-201ENST00000254480 VENTXO95231 258 aa15.51■□□□□ 0.07
SMARCC1-201ENST00000254480 ZNF672Q499Z4 452 aaPredicted RBP15.51■□□□□ 0.07
SMARCC1-201ENST00000254480 DOCK6Q96HP0 2047 aa15.51■□□□□ 0.07
SMARCC1-201ENST00000254480 A0A0U1RRA0 63 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 F8VVB4 439 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 F8VWA3 439 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 H7C1H1 209 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 LILRA1O75019 489 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 LRTM2Q8N967 370 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 TYMSP04818 313 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 ATP5IP56385 69 aaPredicted RBP15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 RIPPLY3P57055 190 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 RPL23P62829 140 aaKnown RBP15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 RNF144BQ7Z419 303 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 ROS1P08922 2347 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 CSRP1P21291 193 aaKnown RBP15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 LINC00205P59089 165 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 DMRTA1Q5VZB9 504 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 FAM90A1Q86YD7 464 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 TMEM167AQ8TBQ9 72 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 PEMTQ9UBM1 199 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 H0YIZ8 118 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 ZNF324BQ6AW86 544 aaPredicted RBP15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 TMEM144Q7Z5S9 345 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 OR5AN1Q8NGI8 311 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 C2orf88Q9BSF0 95 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 PRSS22Q9GZN4 317 aa15.5■□□□□ 0.07
SMARCC1-201ENST00000254480 SMIM13P0DJ93 91 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 MYOD1P15172 320 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 RPL15P61313 204 aaKnown RBP15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 WFDC1Q9HC57 220 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 GZMBP10144 247 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 ACACAQ13085 2346 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 CCL20P78556 96 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 OR10J3Q5JRS4 329 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 C1QL4Q86Z23 238 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 CACNG8Q8WXS5 425 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 JMJD8Q96S16 334 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 IGHV3-64A0A075B6Q5 118 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 IGKV1-27A0A075B6S5 117 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 DUTP33316 252 aaKnown RBP15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 KLF17Q5JT82 389 aaPredicted RBP15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 VMO1Q7Z5L0 202 aa15.49■□□□□ 0.07
SMARCC1-201ENST00000254480 IGHV3-73A0A0B4J1V6 119 aa15.48■□□□□ 0.07
SMARCC1-201ENST00000254480 E9PLN8 166 aa15.48■□□□□ 0.07
SMARCC1-201ENST00000254480 VKORC1Q9BQB6 163 aa15.48■□□□□ 0.07
SMARCC1-201ENST00000254480 PAPPA-AS1Q5QFB9 102 aa15.48■□□□□ 0.07
SMARCC1-201ENST00000254480 LINC00469Q8N7U9 141 aa15.48■□□□□ 0.07
SMARCC1-201ENST00000254480 NAPSAO96009 420 aa15.48■□□□□ 0.07
SMARCC1-201ENST00000254480 LY6G6FQ5SQ64 297 aa15.48■□□□□ 0.07
SMARCC1-201ENST00000254480 RFNGQ9Y644 331 aa15.48■□□□□ 0.07
SMARCC1-201ENST00000254480 ADMP35318 185 aa15.48■□□□□ 0.07
SMARCC1-201ENST00000254480 C11orf68Q9H3H3 251 aaKnown RBP15.48■□□□□ 0.07
SMARCC1-201ENST00000254480 FXYD7P58549 80 aa15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 GREB1LQ9C091 1923 aaPredicted RBP15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 RIF1Q5UIP0 2472 aaKnown RBP15.47■□□□□ 0.07
SMARCC1-201ENST00000254480 PSPNO60542 156 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms