RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 MARC2Q969Z3 335 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 WDR89Q96FK6 387 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 HIPK2Q9H2X6 1198 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 RBKSQ9H477 322 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 MRPL36Q9P0J6 103 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 CACFD1Q9UGQ2 172 aa13.55□□□□□ -0.24
SNRPA1-201ENST00000254193 SORL1Q92673 2214 aa13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 LYRM1O43325 122 aa13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 YIF1AO95070 293 aa13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 HOXB5P09067 269 aa13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 NPBWR1P48145 328 aa13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 RELQ04864 619 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 C2orf83Q53S99 150 aa13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 TMEM61Q8N0U2 210 aa13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 TMEM170AQ8WVE7 144 aa13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 CCDC32Q9BV29 185 aa13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 DAZ1Q9NQZ3 744 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 MRPL27Q9P0M9 148 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-201ENST00000254193 PITX3O75364 302 aa13.53□□□□□ -0.24
SNRPA1-201ENST00000254193 FRMD6-AS1P0C7T7 363 aa13.53□□□□□ -0.24
SNRPA1-201ENST00000254193 IGHV4-30-4P0DP06 118 aa13.53□□□□□ -0.24
SNRPA1-201ENST00000254193 DHRS2Q13268 280 aa13.53□□□□□ -0.24
SNRPA1-201ENST00000254193 GTSCR1Q86UQ5 136 aa13.53□□□□□ -0.24
SNRPA1-201ENST00000254193 DTD1Q8TEA8 209 aa13.53□□□□□ -0.24
SNRPA1-201ENST00000254193 TMED3Q9Y3Q3 217 aa13.53□□□□□ -0.24
SNRPA1-201ENST00000254193 K7EMT4 169 aa13.52□□□□□ -0.25
SNRPA1-201ENST00000254193 TMEM50AO95807 157 aa13.52□□□□□ -0.25
SNRPA1-201ENST00000254193 IFNA10P01566 189 aa13.52□□□□□ -0.25
SNRPA1-201ENST00000254193 OR4E1P0C645 316 aa13.52□□□□□ -0.25
SNRPA1-201ENST00000254193 NPY1RP25929 384 aa13.52□□□□□ -0.25
SNRPA1-201ENST00000254193 C4orf46Q504U0 113 aa13.52□□□□□ -0.25
SNRPA1-201ENST00000254193 GGNBP1Q5YKI7 109 aa13.52□□□□□ -0.25
SNRPA1-201ENST00000254193 S100ZQ8WXG8 99 aa13.52□□□□□ -0.25
SNRPA1-201ENST00000254193 PTTG2Q9NZH5 202 aa13.52□□□□□ -0.25
SNRPA1-201ENST00000254193 C15orf62A8K5M9 175 aa13.51□□□□□ -0.25
SNRPA1-201ENST00000254193 ADAP1O75689 374 aa13.51□□□□□ -0.25
SNRPA1-201ENST00000254193 SCAF4O95104 1147 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-201ENST00000254193 CD7P09564 240 aa13.51□□□□□ -0.25
SNRPA1-201ENST00000254193 SLC25A6P12236 298 aa13.51□□□□□ -0.25
SNRPA1-201ENST00000254193 CD81P60033 236 aa13.51□□□□□ -0.25
SNRPA1-201ENST00000254193 LYG2Q86SG7 212 aa13.51□□□□□ -0.25
SNRPA1-201ENST00000254193 SBSPONQ8IVN8 264 aa13.51□□□□□ -0.25
SNRPA1-201ENST00000254193 OR4X1Q8NH49 305 aa13.51□□□□□ -0.25
SNRPA1-201ENST00000254193 RNASEH2CQ8TDP1 164 aaKnown RBP13.51□□□□□ -0.25
SNRPA1-201ENST00000254193 IGHV3-49A0A0A0MS15 119 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 RPS10-NUDT3A0A1W2PQS6 291 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 CLN5O75503 358 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 NHLRC4P0CG21 123 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 PRSS54Q6PEW0 395 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 TOMM20LQ6UXN7 152 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 COQ8AQ8NI60 647 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 NEURL2Q9BR09 285 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 C20orf85Q9H1P6 137 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 C19orf73Q9NVV2 129 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 SMPXQ9UHP9 88 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 U3KQ87 197 aa13.5□□□□□ -0.25
SNRPA1-201ENST00000254193 TCRBP04435 133 aa13.49□□□□□ -0.25
SNRPA1-201ENST00000254193 IAPPP10997 89 aa13.49□□□□□ -0.25
SNRPA1-201ENST00000254193 RND2P52198 227 aa13.49□□□□□ -0.25
SNRPA1-201ENST00000254193 ZNF600Q6ZNG1 722 aa13.49□□□□□ -0.25
SNRPA1-201ENST00000254193 RBPMS2Q6ZRY4 209 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-201ENST00000254193 NOXA1Q86UR1 476 aa13.49□□□□□ -0.25
SNRPA1-201ENST00000254193 OR52B4Q8NGK2 314 aa13.49□□□□□ -0.25
SNRPA1-201ENST00000254193 OR10C1Q96KK4 312 aa13.49□□□□□ -0.25
SNRPA1-201ENST00000254193 MAGT1Q9H0U3 335 aa13.49□□□□□ -0.25
SNRPA1-201ENST00000254193 PUS1Q9Y606 427 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNRPA1-201ENST00000254193 TRAV6A0A075B6T7 132 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 IGHV7-4-1A0A0J9YVY3 117 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 MPTX1A8MV57 137 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 IGKV1-17P01599 117 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 TIGITQ495A1 244 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 TMEM116Q8NCL8 245 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 RHPN1-AS1Q9BWJ2 59 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 WFDC10AQ9H1F0 79 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 TUBA4BQ9H853 241 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 BATF3Q9NR55 127 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 TBC1D24Q9ULP9 559 aa13.48□□□□□ -0.25
SNRPA1-201ENST00000254193 IGHV3OR16-13A0A075B7E8 117 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 TRAV14DV4A0A0A6YYC5 116 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 IGHV3-74A0A0B4J1X5 117 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 TRAV25A0A0B4J276 109 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 A8MZ25 164 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 FAM90A26D6RGX4 464 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 IFNA4P05014 189 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 SLC25A4P12235 298 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 ZNF846Q147U1 533 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 DEFB125Q8N687 156 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 ACY3Q96HD9 319 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 ZFAND3Q9H8U3 227 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 NUDT15Q9NV35 164 aa13.47□□□□□ -0.25
SNRPA1-201ENST00000254193 CHEK1O14757 476 aa13.46□□□□□ -0.25
SNRPA1-201ENST00000254193 SYNGR2O43760 224 aa13.46□□□□□ -0.25
SNRPA1-201ENST00000254193 IFNA21P01568 189 aa13.46□□□□□ -0.25
SNRPA1-201ENST00000254193 IGLC1P0CG04 106 aa13.46□□□□□ -0.25
SNRPA1-201ENST00000254193 LAMTOR1Q6IAA8 161 aa13.46□□□□□ -0.25
SNRPA1-201ENST00000254193 ETFRF1Q6IPR1 90 aa13.46□□□□□ -0.25
SNRPA1-201ENST00000254193 SLC16A13Q7RTY0 426 aa13.46□□□□□ -0.25
SNRPA1-201ENST00000254193 NPIPB3Q92617 1050 aa13.46□□□□□ -0.25
SNRPA1-201ENST00000254193 RNF2Q99496 336 aa13.46□□□□□ -0.25
SNRPA1-201ENST00000254193 GINS3Q9BRX5 216 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms