RNA–Protein interactions for RNA: ENST00000253024.9

TRIM28-201, Transcript of tripartite motif containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM28, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-201ENST00000253024 CFHR2P36980 270 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 PDLIM4P50479 330 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 SSTP61278 116 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 ADIPOQQ15848 244 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 CR1LQ2VPA4 569 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 AARDQ4LEZ3 155 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 ATOH7Q8N100 152 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 V9GYV3 84 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 GCGP01275 180 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 ZNF355PQ9NSJ1 428 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 RPL8P62917 257 aaKnown RBP17.28■□□□□ 0.36
TRIM28-201ENST00000253024 TIGITQ495A1 244 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 FLYWCH2Q96CP2 140 aaKnown RBP17.28■□□□□ 0.36
TRIM28-201ENST00000253024 ZNF714Q96N38 554 aa17.28■□□□□ 0.36
TRIM28-201ENST00000253024 TECRQ9NZ01 308 aaKnown RBP17.28■□□□□ 0.36
TRIM28-201ENST00000253024 ABHD17AQ96GS6 310 aa17.27■□□□□ 0.36
TRIM28-201ENST00000253024 NCOR2Q9Y618 2525 aa17.27■□□□□ 0.36
TRIM28-201ENST00000253024 CHD8Q9HCK8 2581 aa17.27■□□□□ 0.36
TRIM28-201ENST00000253024 APOA2P02652 100 aa17.27■□□□□ 0.35
TRIM28-201ENST00000253024 GPR6P46095 362 aaPredicted RBP17.27■□□□□ 0.35
TRIM28-201ENST00000253024 TMEM108Q6UXF1 575 aa17.27■□□□□ 0.35
TRIM28-201ENST00000253024 SSBP4Q9BWG4 385 aaPredicted RBP17.27■□□□□ 0.35
TRIM28-201ENST00000253024 GNB4Q9HAV0 340 aa17.27■□□□□ 0.35
TRIM28-201ENST00000253024 FAM90A9PA6NNJ1 464 aa17.26■□□□□ 0.35
TRIM28-201ENST00000253024 CAMPP49913 170 aa17.26■□□□□ 0.35
TRIM28-201ENST00000253024 ZNF430Q9H8G1 570 aaPredicted RBP17.26■□□□□ 0.35
TRIM28-201ENST00000253024 TUBG2Q9NRH3 451 aa17.26■□□□□ 0.35
TRIM28-201ENST00000253024 A6NNC1 897 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 H0YJW9 148 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 COX7A2P2O60397 106 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 LY6HO94772 140 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 IBA57Q5T440 356 aaKnown RBP17.25■□□□□ 0.35
TRIM28-201ENST00000253024 BTF3L4Q96K17 158 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 SLC35E1Q96K37 410 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 NDUFAF3Q9BU61 184 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 CD99P14209 185 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 OR1B1Q8NGR6 318 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 SNHG12Q9BXW3 62 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 DYNLRB1Q9NP97 96 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 CTSZQ9UBR2 303 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 S4R3C0 116 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 NKX6-3A6NJ46 265 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 C17orf100A8MU93 164 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 CORTO00230 105 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 SRIP30626 198 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 CD69Q07108 199 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 Q6ZS92 163 aa17.25■□□□□ 0.35
TRIM28-201ENST00000253024 SPTBN4Q9H254 2564 aa17.24■□□□□ 0.35
TRIM28-201ENST00000253024 A0A1B0GWJ7 208 aa17.24■□□□□ 0.35
TRIM28-201ENST00000253024 C16orf97H3BN30 126 aa17.24■□□□□ 0.35
TRIM28-201ENST00000253024 FAM222BQ8WU58 562 aa17.24■□□□□ 0.35
TRIM28-201ENST00000253024 A0A1W2PRD5 423 aa17.24■□□□□ 0.35
TRIM28-201ENST00000253024 A0A1W2PRF3 423 aa17.24■□□□□ 0.35
TRIM28-201ENST00000253024 A0A1W2PRM7 423 aa17.24■□□□□ 0.35
TRIM28-201ENST00000253024 COX7A1P24310 79 aa17.24■□□□□ 0.35
TRIM28-201ENST00000253024 ERHP84090 104 aaKnown RBP17.24■□□□□ 0.35
TRIM28-201ENST00000253024 SLC25A33Q9BSK2 321 aa17.24■□□□□ 0.35
TRIM28-201ENST00000253024 PPIAL4AQ9Y536 164 aa17.24■□□□□ 0.35
TRIM28-201ENST00000253024 PPIAL4EA0A075B759 164 aa17.23■□□□□ 0.35
TRIM28-201ENST00000253024 A0A1W2PN81 502 aa17.23■□□□□ 0.35
TRIM28-201ENST00000253024 PPIAL4DF5H284 164 aa17.23■□□□□ 0.35
TRIM28-201ENST00000253024 PPIAL4FP0DN26 164 aa17.23■□□□□ 0.35
TRIM28-201ENST00000253024 ADTRPQ96IZ2 230 aa17.23■□□□□ 0.35
TRIM28-201ENST00000253024 TIMM8BQ9Y5J9 83 aaPredicted RBP17.23■□□□□ 0.35
TRIM28-201ENST00000253024 C8orf88P0DMB2 117 aa17.23■□□□□ 0.35
TRIM28-201ENST00000253024 AMTP48728 403 aa17.23■□□□□ 0.35
TRIM28-201ENST00000253024 Q71RC1 249 aaPredicted RBP17.23■□□□□ 0.35
TRIM28-201ENST00000253024 SLC25A2Q9BXI2 301 aa17.23■□□□□ 0.35
TRIM28-201ENST00000253024 ZNF253O75346 499 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 AREGP15514 252 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 CGB1A6NKQ9 187 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 ISLRO14498 428 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 GATA4P43694 442 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 WNT10AQ9GZT5 417 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 TMEM106BQ9NUM4 274 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 CELSR1Q9NYQ6 3014 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 THBDP07204 575 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 GFRALQ6UXV0 394 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 OR1L8Q8NGR8 309 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 TMEM167BQ9NRX6 74 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 LINC00312Q9Y6C7 94 aa17.22■□□□□ 0.35
TRIM28-201ENST00000253024 TNFRSF1AP19438 455 aa17.21■□□□□ 0.35
TRIM28-201ENST00000253024 TNXAQ16473 311 aa17.21■□□□□ 0.35
TRIM28-201ENST00000253024 GAL3ST2Q9H3Q3 398 aa17.21■□□□□ 0.35
TRIM28-201ENST00000253024 DNAJC4Q9NNZ3 241 aa17.21■□□□□ 0.35
TRIM28-201ENST00000253024 PRRG2O14669 202 aa17.21■□□□□ 0.35
TRIM28-201ENST00000253024 TPPP2P59282 170 aa17.21■□□□□ 0.35
TRIM28-201ENST00000253024 PATE2Q6UY27 113 aa17.21■□□□□ 0.35
TRIM28-201ENST00000253024 FBXL7Q9UJT9 491 aa17.21■□□□□ 0.35
TRIM28-201ENST00000253024 MKRN2OSH3BPM6 223 aa17.2■□□□□ 0.34
TRIM28-201ENST00000253024 NDUFB3O43676 98 aa17.2■□□□□ 0.34
TRIM28-201ENST00000253024 YPEL3P61236 119 aaPredicted RBP17.2■□□□□ 0.34
TRIM28-201ENST00000253024 C10orf113Q5VZT2 155 aa17.2■□□□□ 0.34
TRIM28-201ENST00000253024 LINC00305Q7Z4B0 112 aa17.2■□□□□ 0.34
TRIM28-201ENST00000253024 FAM57AQ8TBR7 257 aa17.2■□□□□ 0.34
TRIM28-201ENST00000253024 SFXN3Q9BWM7 321 aa17.2■□□□□ 0.34
TRIM28-201ENST00000253024 AMMECR1Q9Y4X0 333 aaPredicted RBP17.2■□□□□ 0.34
TRIM28-201ENST00000253024 ZFHX3Q15911 3703 aa17.2■□□□□ 0.34
TRIM28-201ENST00000253024 CEACAM4O75871 244 aa17.2■□□□□ 0.34
TRIM28-201ENST00000253024 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms