RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 KLF3P57682 345 aaPredicted RBP8.25□□□□□ -1.09
COPB1-201ENST00000249923 FAM27E3Q08E93 113 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 DNLZQ5SXM8 178 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 ZCCHC24Q8N2G6 241 aaKnown RBP8.25□□□□□ -1.09
COPB1-201ENST00000249923 CCL13Q99616 98 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 MIEN1Q9BRT3 115 aa8.25□□□□□ -1.09
COPB1-201ENST00000249923 FBLL1A6NHQ2 334 aaKnown RBP8.24□□□□□ -1.09
COPB1-201ENST00000249923 RANP62826 216 aaKnown RBP8.24□□□□□ -1.09
COPB1-201ENST00000249923 COTL1Q14019 142 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 TIMM23BQ5SRD1 257 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 OR5B3Q8NH48 314 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 NRN1Q9NPD7 142 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 HELTA6NFD8 242 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 MPDU1O75352 247 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 MIR17HGQ75NE6 70 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 LYG1Q8N1E2 194 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 BEND2Q8NDZ0 799 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 RND1Q92730 232 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 NEUROG1Q92886 237 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 SLC35E1Q96K37 410 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 USF1P22415 310 aaPredicted RBP8.24□□□□□ -1.09
COPB1-201ENST00000249923 GCHFRP30047 84 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 BRS3P32247 399 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 UQCRFS1P47985 274 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 OR4S2Q8NH73 311 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 LINC00479Q96M42 142 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 GNB4Q9HAV0 340 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 SH3BGRL2Q9UJC5 107 aa8.24□□□□□ -1.09
COPB1-201ENST00000249923 SFTPCP11686 197 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 CD99P14209 185 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 NPY1RP25929 384 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 MORN5Q5VZ52 161 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 STPG4Q8N801 248 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 AP1S3Q96PC3 154 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 LINC00574Q9H8X3 128 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 NPVFQ9HCQ7 196 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 M0QZK8 103 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 CXorf1O96002 111 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 MT-CO2P00403 227 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 OR10W1Q8NGF6 305 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 ZNF355PQ9NSJ1 428 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 CLEC5AQ9NY25 188 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 FBXL7Q9UJT9 491 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 ITGB1BP1O14713 200 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 HSPE1P61604 102 aaKnown RBP8.23□□□□□ -1.09
COPB1-201ENST00000249923 LCN2P80188 198 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 SSBP2P81877 361 aaPredicted RBP8.23□□□□□ -1.09
COPB1-201ENST00000249923 FOXL1Q12952 345 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 DIAPH2-AS1Q14236 149 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 CENPWQ5EE01 88 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 ZNF841Q6ZN19 808 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 ZNF788Q6ZQV5 615 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 LAMTOR2Q9Y2Q5 125 aa8.23□□□□□ -1.09
COPB1-201ENST00000249923 DPRXA6NFQ7 191 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 SH2D7A6NKC9 451 aaPredicted RBP8.22□□□□□ -1.09
COPB1-201ENST00000249923 MRPS11P82912 194 aaKnown RBP8.22□□□□□ -1.09
COPB1-201ENST00000249923 POU2AF1Q16633 256 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 RUSC1-AS1Q66K80 236 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 TEPPQ6URK8 271 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 RBMXL3Q8N7X1 1067 aaKnown RBP8.22□□□□□ -1.09
COPB1-201ENST00000249923 OR2T6Q8NHC8 308 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 BET1LQ9NYM9 111 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 OR51B2Q9Y5P1 312 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 REG1BP48304 166 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 SLC25A48Q6ZT89 311 aaKnown RBP8.22□□□□□ -1.09
COPB1-201ENST00000249923 SSX8Q7RTT4 187 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 RCHY1Q96PM5 261 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 CGB1A6NKQ9 187 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 C1orf174Q8IYL3 243 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 RNASE8Q8TDE3 154 aaKnown RBP8.22□□□□□ -1.09
COPB1-201ENST00000249923 C11orf52Q96A22 123 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 SLC45A2Q9UMX9 530 aa8.22□□□□□ -1.09
COPB1-201ENST00000249923 TEX50A0A1B0GTY4 177 aa8.21□□□□□ -1.09
COPB1-201ENST00000249923 GGTLC3B5MD39 225 aa8.21□□□□□ -1.09
COPB1-201ENST00000249923 HSBP1L1C9JCN9 74 aa8.21□□□□□ -1.09
COPB1-201ENST00000249923 LEMD1Q68G75 181 aa8.21□□□□□ -1.09
COPB1-201ENST00000249923 ZGRF1Q86YA3 2104 aa8.21□□□□□ -1.09
COPB1-201ENST00000249923 MUC15Q8N387 334 aa8.21□□□□□ -1.09
COPB1-201ENST00000249923 OR9G1Q8NH87 305 aa8.21□□□□□ -1.09
COPB1-201ENST00000249923 NCOR1P1Q9H4R4 102 aa8.21□□□□□ -1.09
COPB1-201ENST00000249923 RNF7Q9UBF6 113 aa8.21□□□□□ -1.09
COPB1-201ENST00000249923 SAA1P0DJI8 122 aaPredicted RBP8.21□□□□□ -1.1
COPB1-201ENST00000249923 KIR2DS2P43631 304 aa8.21□□□□□ -1.1
COPB1-201ENST00000249923 RPL8P62917 257 aaKnown RBP8.21□□□□□ -1.1
COPB1-201ENST00000249923 CCL8P80075 99 aa8.21□□□□□ -1.1
COPB1-201ENST00000249923 TNFAIP6P98066 277 aaPredicted RBP8.21□□□□□ -1.1
COPB1-201ENST00000249923 IGFL3Q6UXB1 125 aa8.21□□□□□ -1.1
COPB1-201ENST00000249923 Q6ZS92 163 aa8.21□□□□□ -1.1
COPB1-201ENST00000249923 RPUSD1Q9UJJ7 312 aaKnown RBP8.21□□□□□ -1.1
COPB1-201ENST00000249923 PSMB11A5LHX3 300 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 APCSP02743 223 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 CCL3L1P16619 93 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 CD40P25942 277 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 CEACAM8P31997 349 aaPredicted RBP8.2□□□□□ -1.1
COPB1-201ENST00000249923 PRCDQ00LT1 54 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 PRB3Q04118 309 aaPredicted RBP8.2□□□□□ -1.1
COPB1-201ENST00000249923 MZT1Q08AG7 82 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 LDLRAD2Q5SZI1 272 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.2□□□□□ -1.1
COPB1-201ENST00000249923 OR8B2Q96RD0 313 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms