RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 HOXA3O43365 443 aaPredicted RBP11.52□□□□□ -0.57
HCFC2-201ENST00000229330 IGKV1-5P01602 117 aa11.52□□□□□ -0.57
HCFC2-201ENST00000229330 OR9G9P0C7N8 305 aa11.52□□□□□ -0.57
HCFC2-201ENST00000229330 PYYP10082 97 aa11.52□□□□□ -0.57
HCFC2-201ENST00000229330 FER1L6-AS1Q8NA97 138 aa11.52□□□□□ -0.57
HCFC2-201ENST00000229330 FOXI3A8MTJ6 420 aaPredicted RBP11.52□□□□□ -0.57
HCFC2-201ENST00000229330 SYS1-DBNDD2H3BUS1 97 aa11.52□□□□□ -0.57
HCFC2-201ENST00000229330 FHL1Q13642 323 aa11.52□□□□□ -0.57
HCFC2-201ENST00000229330 DCTN5Q9BTE1 182 aa11.52□□□□□ -0.57
HCFC2-201ENST00000229330 OTORQ9NRC9 128 aa11.52□□□□□ -0.57
HCFC2-201ENST00000229330 FBXL7Q9UJT9 491 aa11.52□□□□□ -0.57
HCFC2-201ENST00000229330 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.51□□□□□ -0.57
HCFC2-201ENST00000229330 NKX2-8O15522 239 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 GUSBP1Q15486 140 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 IFI27L1Q96BM0 104 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 A0A1W2PS18 150 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 FAM90A9PA6NNJ1 464 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 F2RL2O00254 374 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 CD3EP07766 207 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 HTN1P15515 57 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 PRSS8Q16651 343 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 OR10W1Q8NGF6 305 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 COQ2Q96H96 371 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 METTL26Q96S19 204 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 KIR2DL4Q99706 377 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 IGKV1-27A0A075B6S5 117 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 SPATA31B1PQ5VZV4 182 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 OR5AN1Q8NGI8 311 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 OR9G1Q8NH87 305 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 SFTA2Q6UW10 78 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 ABCA7Q8IZY2 2146 aa11.51□□□□□ -0.57
HCFC2-201ENST00000229330 IGLC2P0DOY2 106 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 IGLC3P0DOY3 106 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 ID1P41134 155 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 SYT8Q8NBV8 401 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 SIP14410 1827 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 SVILO95425 2214 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 SBF1O95248 1867 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 CIRBPQ14011 172 aaKnown RBP11.5□□□□□ -0.57
HCFC2-201ENST00000229330 CRYGSP22914 178 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 CDCP2Q5VXM1 449 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 KIR3DS1Q14943 382 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 BCL6BQ8N143 479 aaPredicted RBP11.5□□□□□ -0.57
HCFC2-201ENST00000229330 CLEC7AQ9BXN2 247 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 UBTD1Q9HAC8 227 aa11.5□□□□□ -0.57
HCFC2-201ENST00000229330 UPK2O00526 184 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 IGKCP01834 107 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 Q6ZWC4 215 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 SLC25A2Q9BXI2 301 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 MPDZO75970 2070 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 KBTBD11-OT1A0A1B0GTJ5 212 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 NPIPB6E9PJ23 425 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 A8MWV9 139 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 RFPL3SP0C7P2 107 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 LOXL3P58215 753 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 CSRP2Q16527 193 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 DMRTC2Q8IXT2 367 aaPredicted RBP11.49□□□□□ -0.57
HCFC2-201ENST00000229330 MGST2Q99735 147 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 RSPO3Q9BXY4 272 aaPredicted RBP11.49□□□□□ -0.57
HCFC2-201ENST00000229330 HES7Q9BYE0 225 aa11.49□□□□□ -0.57
HCFC2-201ENST00000229330 SEPSECSQ9HD40 501 aaKnown RBP11.49□□□□□ -0.57
HCFC2-201ENST00000229330 HEATR5BQ9P2D3 2071 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 RAB9AP51151 201 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 ZFAND6Q6FIF0 208 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 A0A0G2JMM0 328 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 A0A1W2PPB8 328 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 KIR3DP1A8MWS1 328 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 YPEL1O60688 119 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 NUP35Q8NFH5 326 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 YPEL2Q96QA6 119 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 ANAPC10Q9UM13 185 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 SH2D7A6NKC9 451 aaPredicted RBP11.48□□□□□ -0.57
HCFC2-201ENST00000229330 FOXH1O75593 365 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 DUTP33316 252 aaKnown RBP11.48□□□□□ -0.57
HCFC2-201ENST00000229330 CD69Q07108 199 aa11.48□□□□□ -0.57
HCFC2-201ENST00000229330 NXT2Q9NPJ8 142 aaKnown RBP11.48□□□□□ -0.57
HCFC2-201ENST00000229330 DNAJC13O75165 2243 aa11.47□□□□□ -0.57
HCFC2-201ENST00000229330 CACNA1DQ01668 2161 aa11.47□□□□□ -0.57
HCFC2-201ENST00000229330 PAPPA-AS1Q5QFB9 102 aa11.47□□□□□ -0.57
HCFC2-201ENST00000229330 PNRC2Q9NPJ4 139 aaKnown RBP11.47□□□□□ -0.57
HCFC2-201ENST00000229330 TPRP12270 2363 aaKnown RBP11.47□□□□□ -0.57
HCFC2-201ENST00000229330 A0A0G2JRQ6 117 aa11.47□□□□□ -0.57
HCFC2-201ENST00000229330 TCRBV4S1A1TA0A5B7 111 aa11.47□□□□□ -0.57
HCFC2-201ENST00000229330 APC2O95996 2303 aa11.47□□□□□ -0.57
HCFC2-201ENST00000229330 CACNA1EQ15878 2313 aa11.47□□□□□ -0.57
HCFC2-201ENST00000229330 IGLV3-32A0A0A0MS00 114 aa11.47□□□□□ -0.57
HCFC2-201ENST00000229330 C16orf97H3BN30 126 aa11.47□□□□□ -0.57
HCFC2-201ENST00000229330 PRR33A8MZF0 331 aa11.47□□□□□ -0.57
HCFC2-201ENST00000229330 TRAV5A0A0B4J249 113 aa11.46□□□□□ -0.57
HCFC2-201ENST00000229330 PPP1R17O96001 155 aa11.46□□□□□ -0.57
HCFC2-201ENST00000229330 PPBPP02775 128 aa11.46□□□□□ -0.57
HCFC2-201ENST00000229330 SAA1P0DJI8 122 aaPredicted RBP11.46□□□□□ -0.57
HCFC2-201ENST00000229330 GAGE2BQ13066 116 aa11.46□□□□□ -0.57
HCFC2-201ENST00000229330 GAGE2EQ4V326 116 aa11.46□□□□□ -0.57
HCFC2-201ENST00000229330 KLHDC3Q9BQ90 382 aa11.46□□□□□ -0.57
HCFC2-201ENST00000229330 GAGE2DQ9UEU5 116 aa11.46□□□□□ -0.57
HCFC2-201ENST00000229330 C5orf63A6NC05 138 aa11.46□□□□□ -0.57
HCFC2-201ENST00000229330 NPIPB11E5RHQ5 1161 aa11.46□□□□□ -0.57
HCFC2-201ENST00000229330 MORN2Q502X0 79 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms