RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 BIVMQ86UB2 503 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 MINOS1-NBL1R4GNA1 71 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 RLFQ13129 1914 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 DUSP14O95147 198 aaKnown RBP19.22■□□□□ 0.67
TARBP1-201ENST00000040877 IGHV3-11P01762 117 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 CTAG1AP78358 180 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 LY6G6FQ5SQ64 297 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 TMEM101Q96IK0 257 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 HIST1H4GQ99525 98 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 TMEM178BH3BS89 294 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 ATP5LO75964 103 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 B3GALT5-AS1P59052 145 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 CCL20P78556 96 aa19.22■□□□□ 0.67
TARBP1-201ENST00000040877 SNRNP200O75643 2136 aaKnown RBP19.21■□□□□ 0.67
TARBP1-201ENST00000040877 KLK15Q9H2R5 256 aa19.21■□□□□ 0.67
TARBP1-201ENST00000040877 WDR83OSQ9Y284 106 aa19.21■□□□□ 0.67
TARBP1-201ENST00000040877 LHFPL1Q86WI0 220 aa19.21■□□□□ 0.67
TARBP1-201ENST00000040877 PRSS2P07478 247 aa19.21■□□□□ 0.67
TARBP1-201ENST00000040877 HOXA5P20719 270 aa19.21■□□□□ 0.67
TARBP1-201ENST00000040877 TMEM42Q69YG0 159 aa19.21■□□□□ 0.67
TARBP1-201ENST00000040877 FER1L6-AS1Q8NA97 138 aa19.21■□□□□ 0.67
TARBP1-201ENST00000040877 GATA2P23769 480 aaPredicted RBP19.21■□□□□ 0.67
TARBP1-201ENST00000040877 DMRTA1Q5VZB9 504 aa19.21■□□□□ 0.67
TARBP1-201ENST00000040877 UNQ6494/PRO21346Q6UXR6 183 aa19.21■□□□□ 0.67
TARBP1-201ENST00000040877 DMRTA2Q96SC8 542 aa19.21■□□□□ 0.67
TARBP1-201ENST00000040877 PNRC2Q9NPJ4 139 aaKnown RBP19.21■□□□□ 0.67
TARBP1-201ENST00000040877 FABP5P3A8MUU1 101 aa19.2■□□□□ 0.66
TARBP1-201ENST00000040877 LDLRAD4O15165 306 aa19.2■□□□□ 0.66
TARBP1-201ENST00000040877 MSRB2Q9Y3D2 182 aa19.2■□□□□ 0.66
TARBP1-201ENST00000040877 CACNA1DQ01668 2161 aa19.2■□□□□ 0.66
TARBP1-201ENST00000040877 F8VVB4 439 aa19.2■□□□□ 0.66
TARBP1-201ENST00000040877 F8VWA3 439 aa19.2■□□□□ 0.66
TARBP1-201ENST00000040877 ZNF256Q9Y2P7 627 aaPredicted RBP19.2■□□□□ 0.66
TARBP1-201ENST00000040877 IGHV2-26A0A0B4J1V2 119 aa19.2■□□□□ 0.66
TARBP1-201ENST00000040877 FOXL2NBQ6ZUU3 175 aa19.2■□□□□ 0.66
TARBP1-201ENST00000040877 DNLZQ5SXM8 178 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 TRBV6-6A0A0A6YYG2 114 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 LEPP41159 167 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 MEIG1Q5JSS6 88 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 IGKV1D-8A0A087WSZ0 117 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 OR11H12B2RN74 326 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 IGHV1-8P0DP01 117 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 OR11H1Q8NG94 326 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 OR11H2Q8NH07 326 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 ZNF414Q96IQ9 312 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 NAPSAO96009 420 aa19.19■□□□□ 0.66
TARBP1-201ENST00000040877 C7orf71A4D174 169 aa19.18■□□□□ 0.66
TARBP1-201ENST00000040877 IZUMO1RA6ND01 250 aa19.18■□□□□ 0.66
TARBP1-201ENST00000040877 A0A0G2JNJ9 132 aa19.18■□□□□ 0.66
TARBP1-201ENST00000040877 Q9UFV3 132 aa19.18■□□□□ 0.66
TARBP1-201ENST00000040877 ATOH7Q8N100 152 aa19.18■□□□□ 0.66
TARBP1-201ENST00000040877 ALKBH7Q9BT30 221 aaPredicted RBP19.18■□□□□ 0.66
TARBP1-201ENST00000040877 TRAV40A0A0B4J280 105 aa19.18■□□□□ 0.66
TARBP1-201ENST00000040877 OTX1P32242 354 aaPredicted RBP19.18■□□□□ 0.66
TARBP1-201ENST00000040877 IGKV1-27A0A075B6S5 117 aa19.17■□□□□ 0.66
TARBP1-201ENST00000040877 TMEM167AQ8TBQ9 72 aa19.17■□□□□ 0.66
TARBP1-201ENST00000040877 PLXNA3P51805 1871 aa19.17■□□□□ 0.66
TARBP1-201ENST00000040877 SLC17A3O00476 420 aa19.17■□□□□ 0.66
TARBP1-201ENST00000040877 FOXA3P55318 350 aaPredicted RBP19.17■□□□□ 0.66
TARBP1-201ENST00000040877 LINC01587Q99440 93 aa19.17■□□□□ 0.66
TARBP1-201ENST00000040877 SUMO2P61956 95 aaKnown RBP19.16■□□□□ 0.66
TARBP1-201ENST00000040877 VWA8A3KMH1 1905 aa19.16■□□□□ 0.66
TARBP1-201ENST00000040877 MDC1Q14676 2089 aaKnown RBP19.16■□□□□ 0.66
TARBP1-201ENST00000040877 M0R1W7 72 aa19.16■□□□□ 0.66
TARBP1-201ENST00000040877 TFF1P04155 84 aa19.16■□□□□ 0.66
TARBP1-201ENST00000040877 EPDR1Q9UM22 224 aa19.16■□□□□ 0.66
TARBP1-201ENST00000040877 LOC107984156A0A0G2JMH3 177 aa19.16■□□□□ 0.66
TARBP1-201ENST00000040877 B4DSR2 109 aa19.16■□□□□ 0.66
TARBP1-201ENST00000040877 ARL17AQ8IVW1 177 aa19.16■□□□□ 0.66
TARBP1-201ENST00000040877 ORMDL3Q8N138 153 aa19.16■□□□□ 0.66
TARBP1-201ENST00000040877 C1QTNF9BB2RNN3 333 aa19.15■□□□□ 0.66
TARBP1-201ENST00000040877 LDLRAD2Q5SZI1 272 aa19.15■□□□□ 0.66
TARBP1-201ENST00000040877 TMEM200BQ69YZ2 307 aa19.15■□□□□ 0.66
TARBP1-201ENST00000040877 FNDC1Q4ZHG4 1894 aaPredicted RBP19.15■□□□□ 0.66
TARBP1-201ENST00000040877 FREM3P0C091 2139 aa19.15■□□□□ 0.66
TARBP1-201ENST00000040877 H0YIZ8 118 aa19.15■□□□□ 0.66
TARBP1-201ENST00000040877 IGHV3OR16-8A0A075B7F1 116 aa19.15■□□□□ 0.66
TARBP1-201ENST00000040877 PSPNO60542 156 aa19.15■□□□□ 0.66
TARBP1-201ENST00000040877 C2orf88Q9BSF0 95 aa19.15■□□□□ 0.66
TARBP1-201ENST00000040877 TMEM262E9PQX1 116 aa19.14■□□□□ 0.66
TARBP1-201ENST00000040877 TRAV41A0A0B4J266 112 aa19.14■□□□□ 0.65
TARBP1-201ENST00000040877 RNASE4P34096 147 aaKnown RBP19.14■□□□□ 0.65
TARBP1-201ENST00000040877 GLRX5Q86SX6 157 aa19.14■□□□□ 0.65
TARBP1-201ENST00000040877 C8orf46Q8TAG6 207 aa19.14■□□□□ 0.65
TARBP1-201ENST00000040877 OSTCQ9NRP0 149 aa19.14■□□□□ 0.65
TARBP1-201ENST00000040877 TMEM8BA6NDV4 472 aa19.14■□□□□ 0.65
TARBP1-201ENST00000040877 RPL23P62829 140 aaKnown RBP19.14■□□□□ 0.65
TARBP1-201ENST00000040877 TPTE2P1Q5T6R2 138 aa19.14■□□□□ 0.65
TARBP1-201ENST00000040877 PAX8Q06710 450 aa19.13■□□□□ 0.65
TARBP1-201ENST00000040877 TRAV21A0A0B4J279 112 aa19.13■□□□□ 0.65
TARBP1-201ENST00000040877 DPRXA6NFQ7 191 aa19.13■□□□□ 0.65
TARBP1-201ENST00000040877 APOHP02749 345 aaPredicted RBP19.13■□□□□ 0.65
TARBP1-201ENST00000040877 CMC4P56277 68 aaPredicted RBP19.13■□□□□ 0.65
TARBP1-201ENST00000040877 CD177Q8N6Q3 437 aa19.13■□□□□ 0.65
TARBP1-201ENST00000040877 MBD3L1Q8WWY6 194 aa19.13■□□□□ 0.65
TARBP1-201ENST00000040877 CD24P25063 80 aa19.13■□□□□ 0.65
TARBP1-201ENST00000040877 PLAURQ03405 335 aa19.13■□□□□ 0.65
TARBP1-201ENST00000040877 EFNB3Q15768 340 aa19.13■□□□□ 0.65
TARBP1-201ENST00000040877 GNLYP22749 145 aa19.12■□□□□ 0.65
TARBP1-201ENST00000040877 Q6ZS49 121 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms