RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Tjp1P39447 1745 aaKnown RBP5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Gm20825J3QM67 227 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Ceacam1P31809 521 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Taar2Q5QD17 339 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Tmem222Q8BVA2 208 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Tctn1Q8BZ64 593 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 UmodQ91X17 642 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Zfp407G3UVV3 2246 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Wdr81Q5ND34 1934 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Tmem238A9JSM3 176 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Tmem95P0DJF3 176 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Olfr322Q5NCC8 327 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 BocQ6AZB0 1110 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Cmtm8Q9CZR4 173 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Wdr54Q9R0D8 334 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Siva1O54926 175 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Hoxc4Q08624 264 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Smug1Q6P5C5 279 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Plppr1Q8BFZ2 325 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Asxl3Q8C4A5 2259 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Sipa1l1Q8C0T5 1782 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Alkal1J3QPP8 127 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 RaxO35602 342 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 RhogP84096 191 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Olfr93Q6UAH1 312 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Mbnl2Q8C181 373 aaKnown RBP5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Q8CF25 301 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Hcfc2Q9D968 241 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Eif3gQ9Z1D1 320 aaKnown RBP5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 RgrQ9Z2B3 291 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Ncor2Q9WU42 2472 aaKnown RBP5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Gm42957D6RFQ2 366 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Hbb-b2P02089 147 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Acyp2P56375 106 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Samd5Q3V1H9 173 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Psmb11Q8BG41 302 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Pex11bQ9Z210 259 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 Gm12117V9GXK0 151 aa5.4□□□□□ -1.54
Vcan-203ENSMUST00000109546 PvrigA0A1B0GS01 234 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Olfr1419Q7TQS2 343 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Rnf182Q8C432 247 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Trav6n-5A0A075B621 112 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Trav6-5A0A075B6B5 112 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Tmem233D3Z1U7 110 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Ankrd66J3QNN4 192 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 RrhO35214 337 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Gp6P0C191 313 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 GastP48757 101 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Ucp3P56501 308 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Sumo2P61957 95 aaKnown RBP5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Plpp1Q61469 283 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 RimklaQ6PFX8 380 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Sdhaf4Q8BTE0 104 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Pdlim5Q8CI51 591 aaKnown RBP5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Pbp2Q8VIN1 187 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Ighv16-1A0A0A6YW39 117 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 BC049352E9Q2Z6 85 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Klf9O35739 244 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Fpr2O88536 351 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Olfr94Q6UAH0 386 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Rae1Q8C570 368 aaKnown RBP5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Ybx3Q9JKB3 361 aaKnown RBP5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Mlf1Q9QWV4 267 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 BC053393A0A0B4J1F6 192 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Gm10358A0A1D5RLD8 333 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 BC024063A0A1W2P7G7 749 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Gm29776A0A286YEC0 699 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Fam53aE9PV82 402 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Vmn1r168K7N6B6 309 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Klk1b4P00757 256 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 GapdhP16858 333 aaKnown RBP5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Vmn1r236Q05A06 334 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Tmem225Q9D9S2 230 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Gm3839S4R1W1 333 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Trbv26A0A0B4J1P5 115 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Umad1E0CX23 159 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Olfr178E9Q9T3 319 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Ccl1P10146 92 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Kcnab1P63143 401 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Kdm4dQ3U2K5 510 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Zdhhc25Q810M4 279 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Olfr1258Q8VGN6 311 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Cldnd1Q9CQX5 253 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 NgfrQ9Z0W1 417 aa5.4□□□□□ -1.55
Vcan-203ENSMUST00000109546 Nlgn4lB0F2B4 945 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Smim18J3QNP2 93 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Gm933J3QPC1 141 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Tnfsf11O35235 316 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Rnase9P60154 184 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Zdhhc14Q8BQQ1 489 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Olfr577Q8VH11 312 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Ppp6cQ9CQR6 305 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Hyls1Q9CXX0 307 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Fam219aQ9D772 157 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Slc25a18Q9DB41 320 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Il18bpQ9Z0M9 193 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 H60bB1B212 251 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 Gm21900J3QP38 180 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 F11rO88792 300 aa5.39□□□□□ -1.55
Vcan-203ENSMUST00000109546 LifP09056 203 aa5.39□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 64.3 ms