RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 KTN1-AS1Q86SY8 53 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 DHFR2Q86XF0 187 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 C10orf126Q8N4M7 172 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 DCANP1Q8TF63 244 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 TMEM106AQ96A25 262 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 TIMM21Q9BVV7 248 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 IMUPQ9GZP8 106 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 TMEM133Q9H2Q1 129 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 BOLA2Q9H3K6 86 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 ENY2Q9NPA8 101 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 OPTCQ9UBM4 332 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 CKLFQ9UBR5 152 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 COL4A2P08572 1712 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 ICE1Q9Y2F5 2266 aa1.28□□□□□ -2.2
GYPB-216ENST00000638448 DISP1Q96F81 1524 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 FMN1Q68DA7 1419 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 ROCK1Q13464 1354 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 TRAV4A0A0B4J268 109 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 TRAPPC13A5PLN9 417 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 HMSDA8MTL9 139 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 TMEM238C9JI98 176 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 J3QQQ9 107 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 C1QCP02747 245 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 HTR1AP08908 422 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 P0DMU3 169 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 FAM231AP0DMU4 169 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 FAM231CP0DMU5 169 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 IFI30P13284 250 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 CASP1P29466 404 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 ERP29P30040 261 aaKnown RBP1.27□□□□□ -2.21
GYPB-216ENST00000638448 RPL26P61254 145 aaKnown RBP1.27□□□□□ -2.21
GYPB-216ENST00000638448 SUPT4H1P63272 117 aaKnown RBP1.27□□□□□ -2.21
GYPB-216ENST00000638448 HES1Q14469 280 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 FAM27BQ5VT28 67 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 TRAPPC6BQ86SZ2 158 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 HSPB9Q9BQS6 159 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 SLC39A9Q9NUM3 307 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 RPL26L1Q9UNX3 145 aaKnown RBP1.27□□□□□ -2.21
GYPB-216ENST00000638448 TRPM6Q9BX84 2022 aa1.27□□□□□ -2.21
GYPB-216ENST00000638448 MYO16Q9Y6X6 1858 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 DENND4BO75064 1496 aaPredicted RBP1.26□□□□□ -2.21
GYPB-216ENST00000638448 RFPL4AA6NLU0 287 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 RFPL4AL1F8VTS6 287 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 AIPO00170 330 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 OR5F1O95221 314 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 IFNA1P01562 189 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 CLPSP04118 112 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 SPI1P17947 270 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 S100A4P26447 101 aaKnown RBP1.26□□□□□ -2.21
GYPB-216ENST00000638448 VBP1P61758 197 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 KISS1Q15726 138 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 LINC01554Q52M75 96 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 LYRM7Q5U5X0 104 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 LCA10Q71F78 164 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 HIST3H2BBQ8N257 126 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 OR8B3Q8NGG8 313 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 SLC25A40Q8TBP6 338 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 SH3BGRL3Q9H299 93 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 NHP2Q9NX24 153 aaKnown RBP1.26□□□□□ -2.21
GYPB-216ENST00000638448 EPDR1Q9UM22 224 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 BAIAP2Q9UQB8 552 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 ERGIC3Q9Y282 383 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 LHFPL6Q9Y693 200 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 SIPA1L1O43166 1804 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 CUL9Q8IWT3 2517 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 SMARCA4P51532 1647 aa1.26□□□□□ -2.21
GYPB-216ENST00000638448 TOPBP1Q92547 1522 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 RIC1Q4ADV7 1423 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 NYNRINQ9P2P1 1898 aaKnown RBP1.25□□□□□ -2.21
GYPB-216ENST00000638448 IBA57-AS1B1ANH7 110 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 TRAPPC2LH3BP13 241 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 CIAO1O76071 339 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 IFNA7P01567 189 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 PPBPP02775 128 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 RPSAP08865 295 aaKnown RBP1.25□□□□□ -2.21
GYPB-216ENST00000638448 PPP1R2P41236 205 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 ZNF345Q14585 488 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 KRTAP13-4Q3LI77 160 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 PCOTHQ58A44 107 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 PPP1R2P3Q6NXS1 205 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 S100A7AQ86SG5 101 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 KRTAP13-1Q8IUC0 172 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 C9orf163Q8N9P6 203 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 OR4D11Q8NGI4 311 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 SPACA4Q8TDM5 124 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 YIPF3Q9GZM5 350 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 CENPHQ9H3R5 247 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 LYRM2Q9NU23 88 aaPredicted RBP1.25□□□□□ -2.21
GYPB-216ENST00000638448 PRNDQ9UKY0 176 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 ADAMTS7Q9UKP4 1686 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 CAMSAP1Q5T5Y3 1602 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 DOCK6Q96HP0 2047 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 HECW2Q9P2P5 1572 aa1.25□□□□□ -2.21
GYPB-216ENST00000638448 PXDNLA1KZ92 1463 aa1.24□□□□□ -2.21
GYPB-216ENST00000638448 ITGB4P16144 1822 aa1.24□□□□□ -2.21
GYPB-216ENST00000638448 LTBP2Q14767 1821 aa1.24□□□□□ -2.21
GYPB-216ENST00000638448 A0A087X0T9 212 aa1.24□□□□□ -2.21
GYPB-216ENST00000638448 C7orf71A4D174 169 aa1.24□□□□□ -2.21
GYPB-216ENST00000638448 SDCBPO00560 298 aaPredicted RBP1.24□□□□□ -2.21
GYPB-216ENST00000638448 PGLYRP1O75594 196 aaPredicted RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms