RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 TMEM222Q9H0R3 208 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 UQCR10Q9UDW1 63 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 TRAV14DV4A0A0A6YYC5 116 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 TRAV13-1A0A0B4J241 112 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 KLHL30-AS1Q8NEE0 82 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 ANAPC13Q9BS18 74 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 TCF19Q9Y242 345 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 ZNF257Q9Y2Q1 563 aa14.29□□□□□ -0.12
CACNA1A-253ENST00000637927 TRAV12-1A0A0B4J245 112 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 ESDP10768 282 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 FAM206AQ9NX38 181 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 TMEM8BA6NDV4 472 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 ZP1P60852 638 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 C1QTNF12Q5T7M4 302 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 GTSF1LQ9H1H1 148 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 GCHFRP30047 84 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 KBTBD11-OT1A0A1B0GTJ5 212 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 F8VVB4 439 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 F8VWA3 439 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 IGLV2-23P01705 113 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 SDHCQ99643 169 aaPredicted RBP14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 PRSS22Q9GZN4 317 aa14.28□□□□□ -0.12
CACNA1A-253ENST00000637927 B9A039 149 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 DTX2Q86UW9 622 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 PRADC1Q9BSG0 188 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 UMODP07911 640 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 ATP5G3P48201 142 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 HSPE1P61604 102 aaKnown RBP14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 COL4A1P02462 1669 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 SLC25A28Q96A46 364 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 TMEM126AQ9H061 195 aa14.27□□□□□ -0.12
CACNA1A-253ENST00000637927 IGHV4-4A0A075B6R2 117 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 HAPLN4Q86UW8 402 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 CHTOPQ9Y3Y2 248 aaKnown RBP14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 NPIPB13A6NJU9 1138 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 NPIPB5A8MRT5 1133 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 GZMMP51124 257 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 OCIAD2Q56VL3 154 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 PCP4P48539 62 aa14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 H1FOOQ8IZA3 346 aaPredicted RBP14.27□□□□□ -0.13
CACNA1A-253ENST00000637927 HOXD4P09016 255 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 NBEAP1P0C6P0 100 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 SLC25A39Q9BZJ4 359 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 FOXL1Q12952 345 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 COL11A2P13942 1736 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 A0A0G2JLM5 398 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 LY75O60449 1722 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 SIPA1L3O60292 1781 aaPredicted RBP14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 F5H768 121 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 CA11O75493 328 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 C5orf47Q569G3 176 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 ANKRD36A6QL64 1941 aa14.26□□□□□ -0.13
CACNA1A-253ENST00000637927 NEU4Q8WWR8 484 aaPredicted RBP14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 G6PC2Q9NQR9 355 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 IGLV1-36A0A0B4J1U3 117 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 TPTE2P1Q5T6R2 138 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 CLDN16Q9Y5I7 305 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 DPRXA6NFQ7 191 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 M0R2P5 195 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 STAG3L3P0CL85 134 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 RHOGP84095 191 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 LY6HO94772 140 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 LIMS1P48059 325 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 GAGE2EQ4V326 116 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 GAGE2DQ9UEU5 116 aa14.25□□□□□ -0.13
CACNA1A-253ENST00000637927 RS1O15537 224 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 FCN3O75636 299 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 PLXNA1Q9UIW2 1896 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 TRAV8-3A0A0A6YYJ7 113 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 ZNF729A6NN14 1252 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 VWC2LB2RUY7 222 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 IRF3Q14653 427 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 THAP8Q8NA92 274 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 C1orf159Q96HA4 380 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 MBD3L4A6NDZ8 208 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 MBD3L3A6NE82 208 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 MBD3L5A6NJ08 208 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 ASPHD2Q6ICH7 369 aa14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 MBD3L2Q8NHZ7 208 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 DLX4Q92988 240 aaPredicted RBP14.24□□□□□ -0.13
CACNA1A-253ENST00000637927 TMEM86BQ8N661 226 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 ITGB1BP1O14713 200 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 HLA-DQA1P01909 254 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 CECR9P0C854 216 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 PAPPA-AS1Q5QFB9 102 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 APC2O95996 2303 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 HLA-DQB1P01920 261 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 FAM181AQ8N9Y4 354 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 RBM38Q9H0Z9 239 aaKnown RBP14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 C5orf66Q9H5L9 145 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 OR5P3Q8WZ94 311 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 TMEM54Q969K7 222 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 NPCDR1Q9BY65 106 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 MBNL3Q9NUK0 354 aaKnown RBP14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 A0A087WWL8 130 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 KNCNA6PVL3 124 aa14.23□□□□□ -0.13
CACNA1A-253ENST00000637927 PYYP10082 97 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms