RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 OR13C8Q8NGS7 320 aa14.2□□□□□ -0.14
CLN6-221ENST00000637494 DIRAS2Q96HU8 199 aa14.2□□□□□ -0.14
CLN6-221ENST00000637494 BCL7BQ9BQE9 202 aa14.2□□□□□ -0.14
CLN6-221ENST00000637494 MIXL1Q9H2W2 232 aa14.2□□□□□ -0.14
CLN6-221ENST00000637494 OR4C46A6NHA9 309 aa14.19□□□□□ -0.14
CLN6-221ENST00000637494 I3L2K1 104 aa14.19□□□□□ -0.14
CLN6-221ENST00000637494 CTDSP2O14595 271 aa14.19□□□□□ -0.14
CLN6-221ENST00000637494 TSPAN4O14817 238 aa14.19□□□□□ -0.14
CLN6-221ENST00000637494 CTSGP08311 255 aa14.19□□□□□ -0.14
CLN6-221ENST00000637494 FCGR2BP31994 310 aaPredicted RBP14.19□□□□□ -0.14
CLN6-221ENST00000637494 ADMP35318 185 aa14.19□□□□□ -0.14
CLN6-221ENST00000637494 HOXA1P49639 335 aaPredicted RBP14.19□□□□□ -0.14
CLN6-221ENST00000637494 TMBIM6P55061 237 aa14.19□□□□□ -0.14
CLN6-221ENST00000637494 MARCH1Q8TCQ1 289 aa14.19□□□□□ -0.14
CLN6-221ENST00000637494 FAM110AQ9BQ89 295 aa14.19□□□□□ -0.14
CLN6-221ENST00000637494 NBEAL2Q6ZNJ1 2754 aa14.18□□□□□ -0.14
CLN6-221ENST00000637494 TEX13DA0A0J9YY54 714 aaPredicted RBP14.18□□□□□ -0.14
CLN6-221ENST00000637494 F8W735 103 aaPredicted RBP14.18□□□□□ -0.14
CLN6-221ENST00000637494 CORTO00230 105 aa14.18□□□□□ -0.14
CLN6-221ENST00000637494 IGKV1-5P01602 117 aa14.18□□□□□ -0.14
CLN6-221ENST00000637494 BMI1P35226 326 aa14.18□□□□□ -0.14
CLN6-221ENST00000637494 NPBWR1P48145 328 aa14.18□□□□□ -0.14
CLN6-221ENST00000637494 SP6Q3SY56 376 aa14.18□□□□□ -0.14
CLN6-221ENST00000637494 SPINK9Q5DT21 86 aa14.18□□□□□ -0.14
CLN6-221ENST00000637494 DUSP18Q8NEJ0 188 aa14.18□□□□□ -0.14
CLN6-221ENST00000637494 SMIM4Q8WVI0 70 aa14.18□□□□□ -0.14
CLN6-221ENST00000637494 GINS3Q9BRX5 216 aa14.18□□□□□ -0.14
CLN6-221ENST00000637494 CCDC59Q9P031 241 aaKnown RBP14.18□□□□□ -0.14
CLN6-221ENST00000637494 KMT2CQ8NEZ4 4911 aaKnown RBP14.18□□□□□ -0.14
CLN6-221ENST00000637494 IGHV3OR16-8A0A075B7F1 116 aa14.17□□□□□ -0.14
CLN6-221ENST00000637494 ST8SIA3O43173 380 aa14.17□□□□□ -0.14
CLN6-221ENST00000637494 ZNF207O43670 478 aaKnown RBP14.17□□□□□ -0.14
CLN6-221ENST00000637494 SCGB2A1O75556 95 aa14.17□□□□□ -0.14
CLN6-221ENST00000637494 AKAIN1P0CW23 69 aa14.17□□□□□ -0.14
CLN6-221ENST00000637494 UCP1P25874 307 aa14.17□□□□□ -0.14
CLN6-221ENST00000637494 SURF2Q15527 256 aaPredicted RBP14.17□□□□□ -0.14
CLN6-221ENST00000637494 IZUMO4Q1ZYL8 232 aa14.17□□□□□ -0.14
CLN6-221ENST00000637494 FAM219AQ8IW50 185 aa14.17□□□□□ -0.14
CLN6-221ENST00000637494 HUWE1Q7Z6Z7 4374 aaKnown RBP14.17□□□□□ -0.14
CLN6-221ENST00000637494 INS-IGF2F8WCM5 200 aa14.16□□□□□ -0.14
CLN6-221ENST00000637494 CTDSPLO15194 276 aa14.16□□□□□ -0.14
CLN6-221ENST00000637494 APOC4P55056 127 aa14.16□□□□□ -0.14
CLN6-221ENST00000637494 TMEM116Q8NCL8 245 aa14.16□□□□□ -0.14
CLN6-221ENST00000637494 PRRT1Q99946 306 aa14.16□□□□□ -0.14
CLN6-221ENST00000637494 C6orf62Q9GZU0 229 aaPredicted RBP14.16□□□□□ -0.14
CLN6-221ENST00000637494 NXF2Q9GZY0 626 aaKnown RBP14.16□□□□□ -0.14
CLN6-221ENST00000637494 SMPXQ9UHP9 88 aa14.16□□□□□ -0.14
CLN6-221ENST00000637494 TRAV14DV4A0A0A6YYC5 116 aa14.15□□□□□ -0.14
CLN6-221ENST00000637494 A0A0B4J293 547 aa14.15□□□□□ -0.14
CLN6-221ENST00000637494 IGHV7-4-1A0A0J9YVY3 117 aa14.15□□□□□ -0.14
CLN6-221ENST00000637494 IGHV3-48P01763 117 aa14.15□□□□□ -0.14
CLN6-221ENST00000637494 CMC4P56277 68 aaPredicted RBP14.15□□□□□ -0.14
CLN6-221ENST00000637494 DHODHQ02127 395 aa14.15□□□□□ -0.14
CLN6-221ENST00000637494 DYNC2LI1Q8TCX1 351 aa14.15□□□□□ -0.14
CLN6-221ENST00000637494 RHPN1-AS1Q9BWJ2 59 aa14.15□□□□□ -0.14
CLN6-221ENST00000637494 TMEM222Q9H0R3 208 aa14.15□□□□□ -0.14
CLN6-221ENST00000637494 RSL24D1Q9UHA3 163 aaKnown RBP14.15□□□□□ -0.14
CLN6-221ENST00000637494 UBQLN2Q9UHD9 624 aa14.15□□□□□ -0.14
CLN6-221ENST00000637494 CD5P06127 495 aa14.14□□□□□ -0.15
CLN6-221ENST00000637494 OR5AC1P0C628 307 aa14.14□□□□□ -0.15
CLN6-221ENST00000637494 P0C879 139 aa14.14□□□□□ -0.15
CLN6-221ENST00000637494 ETV6P41212 452 aa14.14□□□□□ -0.15
CLN6-221ENST00000637494 RPL5P46777 297 aaKnown RBP14.14□□□□□ -0.15
CLN6-221ENST00000637494 FAAP20Q6NZ36 180 aa14.14□□□□□ -0.15
CLN6-221ENST00000637494 OR10C1Q96KK4 312 aa14.14□□□□□ -0.15
CLN6-221ENST00000637494 SCGB3A2Q96PL1 93 aa14.14□□□□□ -0.15
CLN6-221ENST00000637494 NAA60Q9H7X0 242 aa14.14□□□□□ -0.15
CLN6-221ENST00000637494 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.14□□□□□ -0.15
CLN6-221ENST00000637494 SCP2D1Q9UJQ7 156 aa14.14□□□□□ -0.15
CLN6-221ENST00000637494 CDS2O95674 445 aa14.13□□□□□ -0.15
CLN6-221ENST00000637494 SPCS3P61009 180 aa14.13□□□□□ -0.15
CLN6-221ENST00000637494 PAFAH1B2P68402 229 aa14.13□□□□□ -0.15
CLN6-221ENST00000637494 OR4C16Q8NGL9 310 aa14.13□□□□□ -0.15
CLN6-221ENST00000637494 RBPMSQ93062 196 aaKnown RBP14.13□□□□□ -0.15
CLN6-221ENST00000637494 KCNIP3Q9Y2W7 256 aa14.13□□□□□ -0.15
CLN6-221ENST00000637494 UBE2CO00762 179 aa14.12□□□□□ -0.15
CLN6-221ENST00000637494 CHEK1O14757 476 aa14.12□□□□□ -0.15
CLN6-221ENST00000637494 OPRK1P41145 380 aa14.12□□□□□ -0.15
CLN6-221ENST00000637494 ZNF600Q6ZNG1 722 aa14.12□□□□□ -0.15
CLN6-221ENST00000637494 RNF2Q99496 336 aa14.12□□□□□ -0.15
CLN6-221ENST00000637494 RTBDNQ9BSG5 229 aaPredicted RBP14.12□□□□□ -0.15
CLN6-221ENST00000637494 CACFD1Q9UGQ2 172 aa14.12□□□□□ -0.15
CLN6-221ENST00000637494 GPR132Q9UNW8 380 aa14.12□□□□□ -0.15
CLN6-221ENST00000637494 LCE6AA0A183 80 aa14.11□□□□□ -0.15
CLN6-221ENST00000637494 RPS10-NUDT3A0A1W2PQS6 291 aa14.11□□□□□ -0.15
CLN6-221ENST00000637494 GSTZ1O43708 216 aaPredicted RBP14.11□□□□□ -0.15
CLN6-221ENST00000637494 RNASE2P10153 161 aaKnown RBP14.11□□□□□ -0.15
CLN6-221ENST00000637494 TMEM268Q5VZI3 342 aa14.11□□□□□ -0.15
CLN6-221ENST00000637494 STPG3Q8N7X2 389 aa14.11□□□□□ -0.15
CLN6-221ENST00000637494 OR51S1Q8NGJ8 323 aa14.11□□□□□ -0.15
CLN6-221ENST00000637494 OR52E5Q8NH55 327 aa14.11□□□□□ -0.15
CLN6-221ENST00000637494 GLYATL2Q8WU03 294 aa14.11□□□□□ -0.15
CLN6-221ENST00000637494 GALNT14Q96FL9 552 aa14.11□□□□□ -0.15
CLN6-221ENST00000637494 TMEM231Q9H6L2 316 aa14.11□□□□□ -0.15
CLN6-221ENST00000637494 IGHV3-49A0A0A0MS15 119 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 A0A0G2JRQ6 117 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 ANKRD20A5PA0PJZ0 165 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 FABP12A6NFH5 140 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 CRYM-AS1A6NIL9 109 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 TMEM50AO95807 157 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms